Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0430 ATGGCAGCTTTTGCTACTTCTTCTCGAGTTGATCAGGAAAAGTACGACATTTTTATTAGTTTCAAAGGTTCAGACGTTAGAGATGGATTTCTTAGCCATTTGACAAAGAAATTACGGCAAGAGAGGATAGATGTGTATGTGGATGAGATGCTAGAGAGGGGAGATGAAATATCAACTACACTCCTGGAAGCAATAGAAAGATCAATAATTGCGTTGGTGATATTCTCTAAAGACTATGCTTCTTCAAGGTGGTGCTTAGAAGAGCTAGTGAAAATAATGGAATGCAAGCGAGTCCATAACCAAATTGTAATTCCAATTTTCTACAATGTTGACCCATCACACGTGAGGCATCAAGAAGGATCTTATGCAAATGCATTTGCTGAGCATGAACAAAAATTCAAAGATGACTTAATGAAGTTGCAAGTTTGGAAATACGTCTTGAAAGAAACTGCAAACTTGTCTGGTTATCCTTCCTCAAACTTTTTCAATGAATCTGATCTTATTGATGAAATAATCAAACATGTATCAAAAAAGCTAGAAGGTAAAAACACATTTGAGCCAAAGCGTCAGCTTATTGGGTTTCAGGAAAATATGGCAGCTATCGAATCATTTATGAAAATTGACTCGCATGAAGTTAGAGTTATTGGTATTTGGGGTAAGGGCGGGATAGGAATTCATGATCTACTACAAGAAATGGCTGAAGAAATAGTTCGTGAGGAATCTAGAGAGCATCCTGAAAGGCGAAGTCGATTAAATGATTCAAAGGAAATTCAATATATGCTAACAAATAGGATGGGAACTGATGCAATTGAAGGCATTAAATTGGAATTAGAGGAGTCAGACAACATATTACGCTTGAGTGCCGATGCTTTCAAAAAAATGAATAATTTAAGATATCTCGAGGTCCAAACTTGCAGCAAAATTCATCTTCCTGATGGTCTGGACTCACTTTGTAATAAACTAAGCTATTTTTACAGGGAAAGTTATCCTTTGAAGTCTCTACCATTAGGTTTTTGTGCAGAAAAACTAGTTGAAATCCATATGCCTTTCAGCCAAGTTGCAAAGCTATGGGATGGTGTGCATAATCTTATGAATTTGAAGACAATAAATCTCAGCTTTTCGTACAAGTTAGTGGAGTTGCCTGATTTGTCCATGGCACAAAACCTAGAAAACGTGGACCTCCGATGTTGTGAAGAGTTACAGAGTATTCATCCATCCATCTTATATCTTCCTAAACTTCTTAATTTGGAGCTAATGGGATGCCAGCAACTAAGGAGCCTTCACGGGGACAACCATATGAAATCTCTCAGACTTCTCACGCTGAACGGTTGCGATAGTCTCAAGAATTTTTTGTTGTCATCCGAAGAAATGACAAGTTTAGATTTATCTCATACTGGTATCGAAACATTGAAGTTGCCAATTGGACGGTTCAGTAAACTTGAAGAGCTATATCTCGGAGGGTCTCTCAGGAGCTTTCAAATAAATGAGCTAAGTTGCTTGACATCTCTTAAAGTATTCTATCTTTTTTATTTTATTGAAGAAATTGACAAATCAAAATTAGTCATTCTGTTTGATGTCTGGCGTTCTTTAGAAAGTTTGTCTTTGATACGATGTGTGGTTTTTGAGATTCCTGACAATATCAGTGCCCTGTCGTTGTTGAAGGCTCTAACACTACTAGGATGTGAAGTGGAGAGTTTGCCTAATAGCATCAAGCATCTGTCACAGCTGAAAATAATTGATGTGGGTGAATGCAAGCGACTTAGGTCGTTACCTGAACTTCCACCTTCCACTACTCATTTTTATGCAGACGGATGTAAATCATTGGAGACCATAGATTTCAAAGTGATGCGAGCAATATATAACAACTCCTGTGAGGTTGAATTCCGTTACCCAGGAAGCACAATTCCAAAGGGCTCCAAATATTCTCAGACGGCCAAGAATTCTGTTACTATTGAGCTTGCACCATCTTCTTCTTCTGACCATTTGTTGGGTTTTGCTTCCTATTGTATTCTTTCTGTATCGGACCGTCACCTTGGCACAGCAACAACAATTTGTAGGAAATTCTACTTTGAAGGTGAAGAGATCTATTACAAGGATGAAAATGAATTCGCTAGCCTCCGGAATTGGATTGGAGATAATGTTTATCAATGGTATGATCCAATGGAACGCATATCAAAGGAAACCAAAAGGAGATTTGATAAGAGCACCACTTATAAGTTTTCGTGTGAATTCTTTGTTCAAGGTGTATTTAGTAATCGTGAGGGCGAATATGATCACTGGATAAAAGGGTGTGGAATTTGGCCAATACATGCATCAAAATTACAAGAGGAGGTTGTTGAAGAAATGGAAATAAAGCTGGAGAATCATCGCACACGTGATTCTGTTAGGAAGAGCAGACTATGA 2403 0.3795 MAAFATSSRVDQEKYDIFISFKGSDVRDGFLSHLTKKLRQERIDVYVDEMLERGDEISTTLLEAIERSIIALVIFSKDYASSRWCLEELVKIMECKRVHNQIVIPIFYNVDPSHVRHQEGSYANAFAEHEQKFKDDLMKLQVWKYVLKETANLSGYPSSNFFNESDLIDEIIKHVSKKLEGKNTFEPKRQLIGFQENMAAIESFMKIDSHEVRVIGIWGKGGIGIHDLLQEMAEEIVREESREHPERRSRLNDSKEIQYMLTNRMGTDAIEGIKLELEESDNILRLSADAFKKMNNLRYLEVQTCSKIHLPDGLDSLCNKLSYFYRESYPLKSLPLGFCAEKLVEIHMPFSQVAKLWDGVHNLMNLKTINLSFSYKLVELPDLSMAQNLENVDLRCCEELQSIHPSILYLPKLLNLELMGCQQLRSLHGDNHMKSLRLLTLNGCDSLKNFLLSSEEMTSLDLSHTGIETLKLPIGRFSKLEELYLGGSLRSFQINELSCLTSLKVFYLFYFIEEIDKSKLVILFDVWRSLESLSLIRCVVFEIPDNISALSLLKALTLLGCEVESLPNSIKHLSQLKIIDVGECKRLRSLPELPPSTTHFYADGCKSLETIDFKVMRAIYNNSCEVEFRYPGSTIPKGSKYSQTAKNSVTIELAPSSSSDHLLGFASYCILSVSDRHLGTATTICRKFYFEGEEIYYKDENEFASLRNWIGDNVYQWYDPMERISKETKRRFDKSTTYKFSCEFFVQGVFSNREGEYDHWIKGCGIWPIHASKLQEEVVEEMEIKLENHRTRDSVRKSRL 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0430 800 Pfam TIR domain 14 185 IPR000157 GO:0007165
Acco07g0430 800 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 181 - -
Acco07g0430 800 ProSiteProfiles TIR domain profile. 13 179 IPR000157 GO:0007165
Acco07g0430 800 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 156 IPR035897 -
Acco07g0430 800 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 435 608 IPR044974 GO:0006952
Acco07g0430 800 Gene3D Ribonuclease Inhibitor 226 453 IPR032675 -
Acco07g0430 800 Gene3D Ribonuclease Inhibitor 454 625 IPR032675 -
Acco07g0430 800 Coils Coil 772 792 - -
Acco07g0430 800 Pfam C-JID domain 630 770 IPR045344 -
Acco07g0430 800 Pfam Leucine Rich Repeat 342 360 IPR011713 -
Acco07g0430 800 Gene3D - 11 185 IPR035897 -
Acco07g0430 800 SUPERFAMILY L domain-like 281 613 - -
Acco07g0430 800 SMART till_3 14 153 IPR000157 GO:0007165
Acco07g0430 800 PRINTS Disease resistance protein signature 571 587 - -
Acco07g0430 800 PRINTS Disease resistance protein signature 214 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0430 Acco-ChrAcco07 5083769 5087308 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0430 228 576 WRKY Transcription Factor Family AT4G12020 35.027 1.26e-37 150