Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0425 ATGGGTCATCACTCTTGCTGTAACAAGCAGAAGGTGAAAAGAGGATTATGGTCACCTGAAGAAGATGAGAAGCTCATCAACTACATCACCACTTATGGCCATGGTTGCTGGAGCTCTGTCCCTAAACTTGCAGGGCTTCAGAGATGCGGGAAAAGTTGCAGATTAAGGTGGATAAATTATCTGAGACCTGATTTGAAACGAGGAAGCTTCTCTCCTCAAGAAGCAGCTCTCATTATTGAACTCCATAGCATATTGGGTAACAGGTGGGCTCAGATTGCAAAGCACCTACCTGGAAGAACTGACAACGAGGTGAAGAACTTTTGGAATTCAAGCGTCAAGAAGAAGCTTCTTTCTCATCATGATCATCTTCTTCTTCCTCCTTTAACCACTTCTGTGGAAACCTTCTTCCCTCTCACTCCAAACCCTAAGAATACTAACATTATCCTAAACCCTCATCTTAATCACCACCAAAACCAGATTTACCTTCCCACTCCTTCATCATCACTTATTCAAGGTCTTCAATTTGATCATGAAGCTTCTCAAGATCTTATCCTTCACTCTCAGAATCCTAATTTGCAAGACATTACACTATCTTCTTATGAAGATACTTGGTCACTGGTAAATCAAGAAAATAATCTGTTGTGCCCACATTACATTGATGAGAAATTCATGAATCCAAGTTCAACTTTTCAGAATCATGAGGGTCAACCTGTGGATCCTAGTATTGAACCGAAAATCTTTCAGAGTACTATTGAGGATTATAATGTTTCATCATCACAAGAACAAGACCCTCTTGTTGCAAGAAATATTCAGAGCTATCCATCTTCTGGTTTTGGTTATCCACCTCAAGATCAAAGTCAAATGGCTGACCTGGCAGCAAATCACACGGAGTTCATAGATGCCATCATATCGTCATTGCCATTATCATCGTCCTTGTCCTCGTCGTCCTCATCATCGTTATCATCAAACAATCAAGTTGTTACAAATATCCCTAGTTTTCCTTCATGTTGGGGGCCATGA 1020 0.4069 MGHHSCCNKQKVKRGLWSPEEDEKLINYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSPQEAALIIELHSILGNRWAQIAKHLPGRTDNEVKNFWNSSVKKKLLSHHDHLLLPPLTTSVETFFPLTPNPKNTNIILNPHLNHHQNQIYLPTPSSSLIQGLQFDHEASQDLILHSQNPNLQDITLSSYEDTWSLVNQENNLLCPHYIDEKFMNPSSTFQNHEGQPVDPSIEPKIFQSTIEDYNVSSSQEQDPLVARNIQSYPSSGFGYPPQDQSQMADLAANHTEFIDAIISSLPLSSSLSSSSSSSLSSNNQVVTNIPSFPSCWGP 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0425 339 SMART sant 66 114 IPR001005 -
Acco07g0425 339 SMART sant 13 63 IPR001005 -
Acco07g0425 339 PANTHER MYB DOMAIN PROTEIN 55 1 308 - -
Acco07g0425 339 Gene3D - 69 116 - -
Acco07g0425 339 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Acco07g0425 339 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Acco07g0425 339 Pfam Myb-like DNA-binding domain 67 109 IPR001005 -
Acco07g0425 339 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Acco07g0425 339 CDD SANT 17 61 IPR001005 -
Acco07g0425 339 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Acco07g0425 339 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Acco07g0425 339 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Acco07g0425 339 FunFam MYB transcription factor 6 66 - -
Acco07g0425 339 FunFam Myb transcription factor 69 116 - -
Acco07g0425 339 CDD SANT 69 109 IPR001005 -
Acco07g0425 339 Gene3D - 11 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0425 Acco-ChrAcco07 5034026 5035561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0425 1 118 MYB Transcription Factor Family AT3G13890 95.763 1.62e-81 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco07g0425 Myb_DNA-binding 1.2e-14 CL0123