Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0424 ATGGGTGCATCAGGAAGATGGTTTAAATCCCTCATTTCTCATAAAAGGCCCTCCTCAAATGATCCTGTTGGCGAGAAGAGTAAGAAGAAATGGAGGCTATGGAGAAGTTCCACAGAAGGTTTTGGATTTGGGTCCTCCGCGAAAAACATGAAGAAGGGACGCGATATTGCATCAGAGAGGTCTGATTCATCTACGTTTGTTGTGGATGATGAACTTGCTTCCGCCATGGCTACTGTGGCAATCCGAGCTGCTCCTAAAGATATCATGCTAATCAAGCAGGAATGGTCTGCTATTCGCATTCAATCTGTGTTTCGAGGTTTCTTAGCTAGAAGAGCTTTGAGGGCATTGAAGGCAGTGGTGAGACTGCAAGCAATATTTAGAGGCAGGAAAGTAAGAAAGCAAGCAGTTATAACACTAAGGTGCATGCATGCTCTTGTTAAAGTTCAGGCACGCGTGAGGGCTATGAATGTAAGGATGTCTCCAGAAGGGAAGGCTATTCAGAAATTATTAGATGATTATCGCAGACAAGCTGCTGATCCTATTAAGCAGGCTGAGGAAGGATGGTGTAACATTCCAGGAACTATAGATGAAGTTAAAGCAAAGATACAAATGAAGCAAGAGGCTGTCATCAAAAGGGAGAGAGCTATGTCTTATTCTTTCTCTGCTCAGTCAAGAGTGAGTGGTAGTCCAAAATCAAAAGGCACAAAGACAGTGAACAAGAGCTTGTTAGAGCAATGGATGACAGTGAAGCCATGGGAAAGCAGGTTGATGGAAGGAGAAGGTACCTATTATGACTCACCTGAAATTACTCCTTTGTCCATGAAAACCAATGACCTTGTTCGTGAACAAAGCAAAGCAAGAAGGAATGGTGTGACTACAACTATTTTCAATAGCTCTCTTCTAACAACAAGTCAATCGACTCTGACATCATTATCTTCAACCTCGAGTTCTGAATGCTGCACATTTGATGATAGCCCTGAATCATCAACTTCATACTCATGCACTTCCATATCACAATCCGTGCCGTTTAGCAGCAATACTATTCTTCAGGAGGTAACAAGAGAGGGAAGGGCATTTAATAGACCTAGCTATATGAATCTGACAGAGTCAACAAAGGCCAAACAAAGAGCTTGTGGTTATGTTACCAATATCAGTGGAGATTGTAGAAGCATTTGTTCTGGTTCTGATCCTTGTGCTAATTTGTGGAAAGGTGTATGTGCCACACCTGAAAGGTTGTCTTACCAAAAAAGAAACTTCGGGAAACAACAAAGGTTGGCTTAG 1281 0.4231 MGASGRWFKSLISHKRPSSNDPVGEKSKKKWRLWRSSTEGFGFGSSAKNMKKGRDIASERSDSSTFVVDDELASAMATVAIRAAPKDIMLIKQEWSAIRIQSVFRGFLARRALRALKAVVRLQAIFRGRKVRKQAVITLRCMHALVKVQARVRAMNVRMSPEGKAIQKLLDDYRRQAADPIKQAEEGWCNIPGTIDEVKAKIQMKQEAVIKRERAMSYSFSAQSRVSGSPKSKGTKTVNKSLLEQWMTVKPWESRLMEGEGTYYDSPEITPLSMKTNDLVREQSKARRNGVTTTIFNSSLLTTSQSTLTSLSSTSSSECCTFDDSPESSTSYSCTSISQSVPFSSNTILQEVTREGRAFNRPSYMNLTESTKAKQRACGYVTNISGDCRSICSGSDPCANLWKGVCATPERLSYQKRNFGKQQRLA 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0424 426 SMART iq_5 115 136 IPR000048 GO:0005515
Acco07g0424 426 SMART iq_5 92 114 IPR000048 GO:0005515
Acco07g0424 426 MobiDBLite consensus disorder prediction 1 31 - -
Acco07g0424 426 ProSiteProfiles IQ motif profile. 117 144 IPR000048 GO:0005515
Acco07g0424 426 Pfam IQ calmodulin-binding motif 95 114 IPR000048 GO:0005515
Acco07g0424 426 Pfam IQ calmodulin-binding motif 117 134 IPR000048 GO:0005515
Acco07g0424 426 Gene3D - 91 142 - -
Acco07g0424 426 ProSiteProfiles IQ motif profile. 93 121 IPR000048 GO:0005515
Acco07g0424 426 PANTHER IQ-DOMAIN 5-RELATED 1 377 - -
Acco07g0424 426 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 136 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0424 Acco-ChrAcco07 4990141 4992977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0424 1 402 IQD Protein Family AT1G72670 42.326 9.72e-87 268
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g0424 07 4990141 4992977 Acco09g1621 09 32590334 32594693 CCT