Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0418 ATGACTAATCTAAGGTTTCTAAAATTCTATTCATCTGGGGCTCAAACATCATTTACTATAAATCTTCCTTCTGGACTTCACTCATTTTCCAAGTCATTACGTTATCTTCGATGGGACAATTTTCCTTCAGAATCTCTATCATTGTCATTTTGTGCTGAAAAGTTAGTCGAACTTCACATGCCTAATAGCCACCTTAAAAAACTATGGGATGGCATGCAGGACTTGGCGAATTTAAGGAAAATAGTTCTTAGTGGATCCAAATATTTGATAGAGTTACCAGATATTTCAAAGGCTCAAAATCTTGAAGAGCTTTCTCTTCATAGTTGTGAAAGTTTAAGCCATCTTGATCCATCAATTTTAACTCTTCCAAGATTGTATGATGTGTATCTTGCGGACTGCATAAGCCTAAAGAGTTTAAAAATTGAGCGTCAGTCAAAATCTATCACATTTATGCTTGTCTCTGGTTGCTGTGGGCTTAAGGAATTTTCATTCTCTTCAAACAAAATAAAGAATTTATATTTAGAGCATTTACCTGTTGAGATATTGGACTTTCCAATTGGGCATATGGAGAAGCTTGAGCAGTTCAGTCTTGACTGCTCAAAACTAAAGAATCTTCCAATTGATGTCATGATTTGTTGCATGAGATCACTTGTGGAGCTCTATCTTTATGATTGCAGTGGAATAATTGACAAATCAAAGCTCCATACCTTATTTGATTCTTTGTTATCTCTACAATCAATTTGTTTGACCGGGGCATGCAAATTAACTGAACTTCCACACAATATCAAACATCTCTTAAGGCTAAAATCTCTTAACATAAGCAATTGTAAGAGCCTTCAATCTTTACCAGAGCTTCCTCCATCCATTGAATACTTAGATGCCCGCAACTGCGCATCATTAAAGACACTACAACACACTTCTCACCTTAGATCTACAATGTTGGCAGATGAAATAATGTCGGGTTCAACTATCTATTCCTCAGTTAATTTTCTCAAAAACCTTTGGCGGCTTACTCTTAGTGGATGTGAACAATTGTTTGAACTCCCTGAATCCATCGGCTCCTTATTCTCATTATTCTCATTGAATTTGCAAGGAAGTAATATAGAGAGCCTTCCTGCTAGCATCAAGCATCTTTTAAATCTTCAACTCATTGACTTAAGAAATTGTAGAAGACTTCGTTCTCTACCAGAACTACCATTCTTCATCACACGTCTTGATGCTGATGGTTGCATATCACTAGAGATTGTAGCCAATTCAGCAACCACACCACATTTGAGTTCCTTAAGTCTAGCAAATTGCTTGAAATTAGAGAATCCCTATATGGAAAGTGCATGCTTTCCATTGAAAGCAGCAACCCACACAAGTAAAAATTGTGAGTTTTGTTACCCAGGAAGAAAAGTTCCAGAATGGTTGAAATCTAATGAGGGACTAGATTCTTCCAACATTATATCTATCAAGCTACCTTCAACCACAACTGACCTAATTGGCTTCGTTCTCTGCTCTGTTCTTTCTCACTTCACTCTTGATCTTAGTTACTTGCAATGCCAACTTTATTACAATGGAAAGAAGCACACATTCCCAACATTTCGAGTGGCGAAAATTTTTGATTCACATCATGTTCTACTATGGTGTGTTCCTGACATGTTCATAAACTTTGGCAAAACAATGGATGGCCAAAACACCAATTACTGGCCAAACGTGTCATTTGAATTCTCTGTTGTTACAGATAGTGGGAAGTTTGTTGATGGTATGATTACAGCATGTGGAGTTTGCCCAATATATGCCTCAGATTATCCCAAATTCATTCAACAAATGGAATTGGAGGCAAACTTGGGTGCCCAAAAAGAGACTTGTCAAGATGCTGATGAGAACTTATTTCATGGAATACTACAATTTGCTAATTTCTCATTGAAGACTGGAAAATGTGGCAATCTGGAAGGAAGTAATATTCCAGAGTGGTTTACTTACAAAAGTTCGACGATAGATCGTTTTAATCGCTTAGAAGGGAGCATTCAGCTTGCTCTAGATTTTGACAAATTGATGGGTTTCATTTTCTGCTTTTTCATACCTAATTTCTCCTCAAAAGAAAGGGATCTATGCTACTCCTCATGTTTCAGTGAATATTGGTGTGAGGTATATTATGACACAGGTTTCATCGGTCCAAGTGGATGGCACTATTCAATGATAAAATTAAACTCAGATAATGTTTTTCTGTGGTATGATCCCTTCAACAGGGAATGCATACAACGCTATCTCCGACGGGTAAAAGGTTGTGCTGCCAAGCTTAACCTTAGATTTTTTTTTCAACTTGGTTATGGTTTGAGCTGTGGGGGGGAGGTATTTAGTATTGGTGATTGTTTGATCAAAGAATGTGGAGTTCGTCCAATATATGTCTCAGAATACACAAACTTTCTTCAACAAGAAAAATTGAAGGTAAGTTATGGAATAAAGAGACATCAAAATATTGATGTTGACCAACAACAACTCCCTTCACCAAAGAAATTGAAGGACTCTTAA 2517 0.3691 MTNLRFLKFYSSGAQTSFTINLPSGLHSFSKSLRYLRWDNFPSESLSLSFCAEKLVELHMPNSHLKKLWDGMQDLANLRKIVLSGSKYLIELPDISKAQNLEELSLHSCESLSHLDPSILTLPRLYDVYLADCISLKSLKIERQSKSITFMLVSGCCGLKEFSFSSNKIKNLYLEHLPVEILDFPIGHMEKLEQFSLDCSKLKNLPIDVMICCMRSLVELYLYDCSGIIDKSKLHTLFDSLLSLQSICLTGACKLTELPHNIKHLLRLKSLNISNCKSLQSLPELPPSIEYLDARNCASLKTLQHTSHLRSTMLADEIMSGSTIYSSVNFLKNLWRLTLSGCEQLFELPESIGSLFSLFSLNLQGSNIESLPASIKHLLNLQLIDLRNCRRLRSLPELPFFITRLDADGCISLEIVANSATTPHLSSLSLANCLKLENPYMESACFPLKAATHTSKNCEFCYPGRKVPEWLKSNEGLDSSNIISIKLPSTTTDLIGFVLCSVLSHFTLDLSYLQCQLYYNGKKHTFPTFRVAKIFDSHHVLLWCVPDMFINFGKTMDGQNTNYWPNVSFEFSVVTDSGKFVDGMITACGVCPIYASDYPKFIQQMELEANLGAQKETCQDADENLFHGILQFANFSLKTGKCGNLEGSNIPEWFTYKSSTIDRFNRLEGSIQLALDFDKLMGFIFCFFIPNFSSKERDLCYSSCFSEYWCEVYYDTGFIGPSGWHYSMIKLNSDNVFLWYDPFNRECIQRYLRRVKGCAAKLNLRFFFQLGYGLSCGGEVFSIGDCLIKECGVRPIYVSEYTNFLQQEKLKVSYGIKRHQNIDVDQQQLPSPKKLKDS 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0418 838 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 30 305 - -
Acco07g0418 838 Gene3D Ribonuclease Inhibitor 314 535 IPR032675 -
Acco07g0418 838 SUPERFAMILY L domain-like 2 306 - -
Acco07g0418 838 Gene3D Ribonuclease Inhibitor 149 313 IPR032675 -
Acco07g0418 838 Pfam Leucine Rich Repeat 54 71 IPR011713 -
Acco07g0418 838 SUPERFAMILY L domain-like 233 518 - -
Acco07g0418 838 Gene3D Ribonuclease Inhibitor 1 142 IPR032675 -
Acco07g0418 838 Pfam C-JID domain 462 597 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0418 Acco-ChrAcco07 4925850 4928464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0418 249 391 WRKY Transcription Factor Family AT4G12020 28.662 2.65e-06 49.7