Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0406 ATGGGACTAAGTAGATTAAGAGCAAAGATTAAAAGGAGCCATCTTTACACATTTGCTTGTCTTAGGCGGACTCACACTGCACCTCAGAATGCTATAAACCTTCAAGGTCCGGGTTTTTCAAGAGTTGTACATTGCAACCACTCTCAACCCCCTGAAAAGAAGTCTCAGTTTTACTGCCGGAATGACATATCAACTACAAAATACAATGTTGTAACATTTTTACCTAAGGCACTCTATGAGCAATTTCGACGGGGTGCTAATATATACTTCCTTGTGGCGGCATGCCTCTCAGCCTCTCCAATCTCACCATTCTCTCCAATCAGCATGATTGCTCCTTTGGCATTTGTTGTTGGGCTTAGTATGGCAAAGGAAGCATTAGAAGATTGGCGCAGGTTTCGTCAGGATGTCAAAGTTAATCACCGGAAAGCTAGTGTCCATGAAGGCAATGGTGTTTTTTCTCTCAAGCAATGGCAGGACATTGTAGTTGGGGATGTAGTAAAAGTAGATAAGGATCAATTTTTCCCTGCTGATTTGCTTTTCTTGTCATCAAGTTATGAGGATGGGATATGCTATGTGGAAACTATGAATTTAGATGGTGAGACAAACCTAAAGGTGAAAAGATCTTTGGAGGTTACCATGCTTCTATATGATGATGAATCTTTCAAAGATTTCTCAGGAATAATTCGTTGTGAAGACCCAAATCCTAGTCTCTACACATTTGTTGGAAATTTTGAGTATGAACGTGAGGTTCATCCAATTGAGCCCAGTCAAATTCTCCTCCGAGATTCAAAGCTCAGGAACACTGATTTCATATATGGAGTGGTCATTTTCACTGGTCATGAAAGCAAAGTGATGCAGAATTCTACAAAAACTCCGTCAAAAAGGAGCAAAATAGAAAGAAAGATGGATTATATCATATTTCTTCTATTCTCTGTTCTTATTTTGATATCCTTGGTCAGTTCTGTAATATTCTCTGTAATCACTAGATTCCAAACAATAAATTGGTGGTATTTAAAGCCCATGCTATCAGATGTCCTGTATGATCCCAATAATGCTGCATTGGCTGGGTTGAGTCATCTGGTTACTGCGCTCATTCTTTATGGATATTTGATACCCATATCGCTTTATGTTTCAATTGAGGTTGTGAAGGTTTTGCAAGCAAACTTGGTTGAACAAGACTTGCACATGTATCACGAAGAAACCGGCACTCCAGCTCGTGCCCGAACGTCAAATTTGAATGAAGAGTTGGGTCAAGTGGACACTATACTTTCTGATAAGACCGGAACTTTGACTTGCAATCAGATGGATTTTTTAAAGTGCTCCATTGCTGGTGTTGCATATGGTGTGAGTTCCAGTGAAGTTGAGCTTGCTACGGCACAGCAGATGGCTCTTGAACTTGAGGAGGACCAGCAGGAGGGTCTTTCCGATTCACCCACACATAAGGTTAACGCATCTGTCTCATGGGAAAATGTTGACCTGGAGACTGTTGTTACTTCCAAGGGTGATGAGGCTCAGACGGCTACTACAAAGGGTTTCAGATTTGAAGACGTTCGCCTCATGAACTGTAACTGGTTGAAGCAGTCCAATCCCGATGTCCTCTTAATGTATTTTCGAATATTAGCTGTTTGCCATACTGCCATTCCTGAGCTGAATGAGGAGACAGGAGCTATAACTTATGAGGCTGAATCCCCTGATGAAGGAGCTTTCTTAGCAGCATCAAGAGAATTTGGTTTTGAGTTTTGTAAAAGAACTCAAGCTAGTGTTTTCATCCGTGAAAATCTTTCACCTTCAGAACAAGCTGTTGAAAGGGAGTACAAAATCCTGAATCTATTGGACTTTACTAGCAAAAGAAAGCGAATGACAGTGATTGTGCGTGATGAGGAGGGAAGCTTACTACTTATGTGCAAAGGGGCTGACAGTATCATATTTGATCGACTGTCAAAGAATGGAAAGACATATTTAGATGCTACAACCAAACATTTGAACGAATATGGAGAAAATGGTTTGAGAACATTGGCTCTAGCTTACAGAAAGCTTGATGAGGAAGAGTACAAAGCTTGGAACATTGAATTTCAGAAAGCTAAAACTGCTGTTGGTCCTGACAGAGAGGAAGTGCTTGAGGAATTAGCTGAAAAAATGGAAAAAGGGCTGATTCTTGTCGGGGCTACTGCTGTGGAAGACAAACTGCAAAATGGGGTTCCCCAATGCATTGATAAACTTGCACAAGCAGGTCTCAAGATCTGGGTTTTGACAGGGGATAAGATGGAAACTGCAATCAACATCGGTTTTTCTTGTAGTTTGCTTCGACATGGCATGAAGCAGATCTGCATATCTATTCCGGAGTCAGACTCAGTTACCAGTTTGGACAAACAGGCCATTAAGGAGGGCATTTTGAATCAAATCATCAATGCCTCACAAATGGTAAAGCTGGAGACAGATCCACTTGCTGCATTTGCATTAATTATTGATGGGAAGGCTCTGGCTTATACTTTAGAAGAAGATATGAAGCGTCAATTTTTGGGATTGGCTGTTGATTGTGCCTCTGTCATCTGCTGTCGTGTGTCTCCCAAGCAAAAGGCATTGGTAACAAGGTTAGTTAAAGAAGGCACTGGGAAGACCACTTTAGGAATTGGTGATGGTGCAAATGACGTTGGCATGATACAAGAAGCTGATATTGGCGTTGGTATTAGTGGGGTTGAAGGTATGCAGGCAGTGATGGCTAGTGACTTCGCAATCGCTCAATTTAGATTTTTGGAACGACTTTTGGTAATCCATGGACACTGGTGCTACAAGAGAATAGCTCAAATGATATGCTATTTCTTCTACAAAAACATAGCTTTTGGTCTCACCATCTTCTATTTTGAGGCCTTGACGAGCTTCTCTGGGCAATCAGTTTATGATGACTGGTACATGATATTGTTCAATGTTGTTCTTACATCATTACCTGTCATTTCACTTGGAGTATTTGAACAAGATGTTCCTTCAGAAGTTTGCTTACAGTTTCCTGCATTATATCAGCAAGGCCCAAGAAATCTGTTCTTTGACTGGTTTAGAATACTGGGATGGATGCTCAATGGTGTATTTTGTTCCCTCGTTGTCTTCTTATTCAACATCTGCATTTTTTATGACCAAGCCTTCCGAGGTGATGGCCGGACCCCGGACATGGCTGTTGTCGGTACCACAATGTTCACTTGCATCATTTGGGCAGTCAACTGCCAGATTGCCCTCATCATTTGCCATTTCACATGGATGCAGTACATATTTATCATAGGAAGTATAGCCTGTTGGTACGTTGTCTTAGTGCTATATGGCATGCTTTCGCCGACCTATTCAAAAACCGCCTACCAAATCCTGCTTGAAGTTCTTGCTCCTGCACCAATGTATTGGCTGGCCACTTTTCTAGTAACAGTTACTTGTAATTTTCCTTACTATGCCCATATATGCTTTCAAAGATGGACAAATCCCTTGGATCATCACATCATCAGAGAGATCAAGCACTTCAAGATGGACGAAGTGGACCAACGCATGTGGAAAAGGGAAAGATCTAAAGCGAGACAGAAAACCAGCATTGGATTCAGTGCAAGAGTGGAAGCTAAGATGAGAAATTTGAAGCAGAAGCTTCAGAGGAAGCAATCAACCTTGCCCTTCATGCCTTCTCCAGATGGACATCAGAACTAA 3678 0.4149 MGLSRLRAKIKRSHLYTFACLRRTHTAPQNAINLQGPGFSRVVHCNHSQPPEKKSQFYCRNDISTTKYNVVTFLPKALYEQFRRGANIYFLVAACLSASPISPFSPISMIAPLAFVVGLSMAKEALEDWRRFRQDVKVNHRKASVHEGNGVFSLKQWQDIVVGDVVKVDKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRSLEVTMLLYDDESFKDFSGIIRCEDPNPSLYTFVGNFEYEREVHPIEPSQILLRDSKLRNTDFIYGVVIFTGHESKVMQNSTKTPSKRSKIERKMDYIIFLLFSVLILISLVSSVIFSVITRFQTINWWYLKPMLSDVLYDPNNAALAGLSHLVTALILYGYLIPISLYVSIEVVKVLQANLVEQDLHMYHEETGTPARARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGVAYGVSSSEVELATAQQMALELEEDQQEGLSDSPTHKVNASVSWENVDLETVVTSKGDEAQTATTKGFRFEDVRLMNCNWLKQSNPDVLLMYFRILAVCHTAIPELNEETGAITYEAESPDEGAFLAASREFGFEFCKRTQASVFIRENLSPSEQAVEREYKILNLLDFTSKRKRMTVIVRDEEGSLLLMCKGADSIIFDRLSKNGKTYLDATTKHLNEYGENGLRTLALAYRKLDEEEYKAWNIEFQKAKTAVGPDREEVLEELAEKMEKGLILVGATAVEDKLQNGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFSCSLLRHGMKQICISIPESDSVTSLDKQAIKEGILNQIINASQMVKLETDPLAAFALIIDGKALAYTLEEDMKRQFLGLAVDCASVICCRVSPKQKALVTRLVKEGTGKTTLGIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFAIAQFRFLERLLVIHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEALTSFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPRNLFFDWFRILGWMLNGVFCSLVVFLFNICIFYDQAFRGDGRTPDMAVVGTTMFTCIIWAVNCQIALIICHFTWMQYIFIIGSIACWYVVLVLYGMLSPTYSKTAYQILLEVLAPAPMYWLATFLVTVTCNFPYYAHICFQRWTNPLDHHIIREIKHFKMDEVDQRMWKRERSKARQKTSIGFSARVEAKMRNLKQKLQRKQSTLPFMPSPDGHQN 1225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0406 1225 SFLD p-type atpase 407 928 IPR044492 -
Acco07g0406 1225 SUPERFAMILY Calcium ATPase, transmembrane domain M 52 1152 IPR023298 -
Acco07g0406 1225 MobiDBLite consensus disorder prediction 1207 1225 - -
Acco07g0406 1225 SUPERFAMILY HAD-like 411 921 IPR036412 -
Acco07g0406 1225 Gene3D - 420 432 IPR023214 -
Acco07g0406 1225 FunFam Phospholipid-transporting ATPase 587 718 - -
Acco07g0406 1225 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 33 1179 - -
Acco07g0406 1225 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Acco07g0406 1225 PRINTS P-type cation-transporting ATPase superfamily signature 877 896 - -
Acco07g0406 1225 Coils Coil 1193 1213 - -
Acco07g0406 1225 Gene3D - 118 289 - -
Acco07g0406 1225 FunFam Phospholipid-transporting ATPase 119 289 - -
Acco07g0406 1225 Gene3D - 433 461 IPR023299 GO:0000166
Acco07g0406 1225 NCBIfam phospholipid-translocating P-type ATPase 58 1163 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Acco07g0406 1225 SUPERFAMILY Calcium ATPase, transduction domain A 146 287 IPR008250 -
Acco07g0406 1225 Pfam Phospholipid-translocating ATPase N-terminal 43 110 IPR032631 -
Acco07g0406 1225 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 519 682 IPR023299 GO:0000166
Acco07g0406 1225 NCBIfam HAD-IC family P-type ATPase 849 958 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco07g0406 1225 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Acco07g0406 1225 FunFam Phospholipid-transporting ATPase 720 917 - -
Acco07g0406 1225 Gene3D - 584 720 IPR023299 GO:0000166
Acco07g0406 1225 Coils Coil 449 469 - -
Acco07g0406 1225 Gene3D - 721 917 IPR023214 -
Acco07g0406 1225 Pfam Phospholipid-translocating P-type ATPase C-terminal 905 1155 IPR032630 -
Acco07g0406 1225 CDD P-type_ATPase_APLT_Dnf-like 60 1036 - -
Acco07g0406 1225 Pfam Cation transport ATPase (P-type) 542 647 - -
Acco07g0406 1225 SFLD Haloacid Dehalogenase 407 928 - -
Acco07g0406 1225 MobiDBLite consensus disorder prediction 1206 1225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0406 Acco-ChrAcco07 4815450 4820979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0406 1 1221 Primary Pumps ATPases AT1G17500 69.943 0.0 1798