Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0400 ATGACGTCGACGGTCATTAGCTACACCATGGTCGTCACTGGTCCCGGGGCCGACCACCTTATCATGGCCGGCCGATTTATCGGTTCTAAAGAACCTTCGCCTCCTTGGCTAGATGATCAGGTTGCAGAGAAAAGAGCACATGACGCAGATCTGAAAAGCATGAAGAAATATGAACGCCATGCTCCAAGAAAAGAAAATGGTAACAGCAGATTAATATCTTCTGCCTCCTCGGGAACCCAACAACAACAATCATACGACTTTACCATGGATTGGTTCGTAGAGAAGGGAATTCCAGAAGTATTTGTGCTTTTGCTTCTTGATTTTGAGATCTTCCTTGTGAGTCTCACTGTTCATCCCATTCCTAATCTCACTTCTGAGCCTCTTCATTTCATCTGCAACTCTTGGGTTGATACATTCAACAACACACAACTCACTCGTGTTTTCTTCATCAACAAGGCGTACCTGCCTAGTCAAACACCAGGACTAGTGGGTCTTGAACGAAAAGTAGAGCTGAAATGTTTAAGAGGAGAACTAAGTGAAGTTCAAGATGCTGATGGAGTTCGGAAGGAATGGGATAGAATCTATGAGTATGCAATTTACAATGACTTGGGTGATGTTGATGCGAATCCAGATCTTGCTCGTCCTACTCTTGGAGGATCCACCCAATATCCCTACCCCCGTAGGCTAAGAACAGGAAGAGCTCCATCAAAAAATGATCCGAGCACTGAGAGTAGACTCCCTCCAGAAGATTCCTTTTCGATCTATGTTCCAAAAGATGATAGATTTGGCGATCAGAAGTTCATTGAGTTTGTGCAACATTTTCCCAAATCATCAATGAACCTTATGAAATCATACATATCAGAGGCATTGGAGGCCTCAGGAAAAGAATTTGAAAGCTTTGAGCATGTTCTTAAAGTACTTTATCAAGATGGTTTCACCTTTAATGTGCCTAAAGCCGTACTTGATGCTATTGCTCAAGTGTTACCTATTCCAACTCCCCCAGATAATGGCAATCTGCTATTAAAGTTTCCAATTCCTAGTGTAATTCAAGATAATCTAGATGGATGGATGACGGATGAAGAATTTGCACGAGAGATGCTTGCTGGTGTGAATCCCGTTTTAATCTGCCTCCTTCAAGAGTTCCCCATAAAAAGCACGCTAGATATTAAAGTCTACGGTGATCATACCTCTTCCATTACAAGACAACACTTGGAGAAGAACATGAATGGGCTCACGGTTTATGAGGCACTGAATTCCAAGAGATTATTCATATTAAATCACTATGATGCATTTTTGCCATATTTGAGGAAGATCAATGGGACTTCTAGAAAGGCTTATGCAAGTAGGACAATCCTTTTACTTCAAAATGATGGGACTTTGAAGCCACTTGCTATTGAGCTGAGTTTACCTCACCCTGATGGAGATAAATGTGGCGCTGTTAGTAAAGTGTATCTTCCTGAAAATGAAGGTGTTGAGGGTACCATTTGGCTTTTGGCTAAAGCTTATGTAGTTGTCAATGACACAGGCTATCATCAACTAGTCAGTCACTGGCTAAATACCCATGCTGTGATGGAGCCATTTGTGATTGCAACACACAGGCAACTCAGTCAACTTCACCCAATTCATAAACTTCTTCATCCTCATTTTCATGACACCTTGTTTATCAATGCACTTGCTCGCCAAAACTTAATCTCTGCAGAAGGAATCATAGAGGACTCATTCTTGCCTGGGAAATATTCCATGGAGATGTCCTCTGTGGTTTACAACAGTTGGAATTTCCTTGAACAAGCCTTACCTGCTGATCTCATCAAGAGAGGAATGGCTGTAGAGGATCCAAGTGCTCCTCATGGCCTTCGCCTTGTGATAGAAGACTACCCTTATGCTGTTGATGGACTTCTAATATGGGATGCTCTGAAGACCTGGGTTTATGACTATGTCACTTATTACTACGAGTCAGATGAGATCCTTAAGCAGGACCCTGAGCTACAATCATGGTGGAAAGAACTAGTAGAAGTAGGTCATGGTGACCTAAAAGATGAGCCATGGTGGCCAAAAATGCAGACTCGTCAAGAGCTAATTCACTCTTGCACTATCATCATATGGATAGCTTCAGCTCTACATGCAGCTGTGAACTTCGGCCAGTACCCTTATGGAGGATATATCCTAAACCGTCCTACTTTAAGCAGAAGGTTGGTGCCTGAGAAGGGAACTGAAGAGTATGAGGAGATGGTGAAGAATCCAGAGCTAGCTTTCTTAAAAACAATCACACCAAAATTTGAGACACTTCTTGATCTTTCAGTTATAGAGATATTGTCAGGCCATACGACTGATGAGGTTTATCTTGGAACAAGGACTATTCCTTACTGGACATATGATAAGAAGGTGTTGGAGGATTTCAAGAAGTTTGGTGAAAGATTGGCTGAGATTGAGAAAAGATTGATAAGGAGGAATGAAGATGGGACACTGAGAAATAGGAATGGTCCAGTGATGGTGCCTTACACTCTGCTTTATCCTAGCAGTGAACCTGGACTTACAGGCAGAGGAATTCCCAATAGTATCTCTATATGA 2568 0.4213 MTSTVISYTMVVTGPGADHLIMAGRFIGSKEPSPPWLDDQVAEKRAHDADLKSMKKYERHAPRKENGNSRLISSASSGTQQQQSYDFTMDWFVEKGIPEVFVLLLLDFEIFLVSLTVHPIPNLTSEPLHFICNSWVDTFNNTQLTRVFFINKAYLPSQTPGLVGLERKVELKCLRGELSEVQDADGVRKEWDRIYEYAIYNDLGDVDANPDLARPTLGGSTQYPYPRRLRTGRAPSKNDPSTESRLPPEDSFSIYVPKDDRFGDQKFIEFVQHFPKSSMNLMKSYISEALEASGKEFESFEHVLKVLYQDGFTFNVPKAVLDAIAQVLPIPTPPDNGNLLLKFPIPSVIQDNLDGWMTDEEFAREMLAGVNPVLICLLQEFPIKSTLDIKVYGDHTSSITRQHLEKNMNGLTVYEALNSKRLFILNHYDAFLPYLRKINGTSRKAYASRTILLLQNDGTLKPLAIELSLPHPDGDKCGAVSKVYLPENEGVEGTIWLLAKAYVVVNDTGYHQLVSHWLNTHAVMEPFVIATHRQLSQLHPIHKLLHPHFHDTLFINALARQNLISAEGIIEDSFLPGKYSMEMSSVVYNSWNFLEQALPADLIKRGMAVEDPSAPHGLRLVIEDYPYAVDGLLIWDALKTWVYDYVTYYYESDEILKQDPELQSWWKELVEVGHGDLKDEPWWPKMQTRQELIHSCTIIIWIASALHAAVNFGQYPYGGYILNRPTLSRRLVPEKGTEEYEEMVKNPELAFLKTITPKFETLLDLSVIEILSGHTTDEVYLGTRTIPYWTYDKKVLEDFKKFGERLAEIEKRLIRRNEDGTLRNRNGPVMVPYTLLYPSSEPGLTGRGIPNSISI 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0400 855 FunFam Lipoxygenase 490 854 - -
Acco07g0400 855 Pfam Lipoxygenase 167 838 IPR013819 GO:0016702|GO:0046872
Acco07g0400 855 SUPERFAMILY Lipoxigenase 156 855 IPR036226 -
Acco07g0400 855 PRINTS Lipoxygenase signature 493 510 IPR013819 GO:0016702|GO:0046872
Acco07g0400 855 PRINTS Lipoxygenase signature 531 551 IPR013819 GO:0016702|GO:0046872
Acco07g0400 855 PRINTS Lipoxygenase signature 511 528 IPR013819 GO:0016702|GO:0046872
Acco07g0400 855 Gene3D PLAT/LH2 domain 48 154 - -
Acco07g0400 855 Gene3D - 155 265 - -
Acco07g0400 855 MobiDBLite consensus disorder prediction 52 77 - -
Acco07g0400 855 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 68 154 IPR036392 GO:0005515
Acco07g0400 855 PRINTS Plant lipoxygenase signature 380 399 IPR001246 GO:0016491
Acco07g0400 855 PRINTS Plant lipoxygenase signature 120 138 IPR001246 GO:0016491
Acco07g0400 855 PRINTS Plant lipoxygenase signature 341 357 IPR001246 GO:0016491
Acco07g0400 855 PRINTS Plant lipoxygenase signature 446 470 IPR001246 GO:0016491
Acco07g0400 855 PRINTS Plant lipoxygenase signature 191 207 IPR001246 GO:0016491
Acco07g0400 855 PRINTS Plant lipoxygenase signature 224 243 IPR001246 GO:0016491
Acco07g0400 855 PRINTS Plant lipoxygenase signature 768 782 IPR001246 GO:0016491
Acco07g0400 855 ProSitePatterns Lipoxygenases iron-binding region signature 1. 511 525 IPR020833 GO:0016702|GO:0046872
Acco07g0400 855 FunFam Lipoxygenase 355 488 - -
Acco07g0400 855 Gene3D - 489 854 - -
Acco07g0400 855 Gene3D - 354 487 - -
Acco07g0400 855 MobiDBLite consensus disorder prediction 212 251 - -
Acco07g0400 855 ProSitePatterns Lipoxygenases iron-binding region signature 2. 538 548 IPR020834 GO:0016702|GO:0046872
Acco07g0400 855 PANTHER LIPOXYGENASE 75 855 IPR000907 GO:0016702|GO:0034440|GO:0046872
Acco07g0400 855 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 153 855 IPR013819 GO:0016702|GO:0046872
Acco07g0400 855 MobiDBLite consensus disorder prediction 52 66 - -
Acco07g0400 855 Gene3D - 266 353 IPR027433 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0400 Acco-ChrAcco07 4765807 4771472 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0400 72 855 Acyl Lipid Metabolism Gene Families AT1G55020 55.247 0.0 874