Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0397 ATGTTGTGTTTTGTCCAATATCTTAAGAGCAGCTGGGAATTGTTCGAGTCTTTTGTCGAACATATAAAATTGAATTGGTCAACTCATTACATTATGAAATTTACCATGCATTCAATGGATCAGGAAGAACCATTATTTCCACAGCTTTTTGAGAATTTGCAAAATTGAAACGGGTTGGGAAAACTGGGAGACGCTGCGGCACTGGAACCGTTTGTGAGCACATTGCCACCACTGTTGGAAGGACAGAAGGCCTTCATTGTTCAATTCGACTACACTCACGACTTTGGAGTTCCTGGAGCCTTCGTCATCAGAAACAATCTTCTCACCGAATTCTATCTCGTGAGCTTGACGCTTGATGGTATCCCACATCATGGATCCGTCCATTTTGTTTGCAACTCCTGGATCTACCCTGCCAACAGATACAGGAGCGATCGCATCTTCTTCGCCAACAAGGCGTATCTTCCGAGCAAAACACCTCCGGCTTTGGCCAAATACAGAGAACAAGAGCTTATTACTTTAAGAGGAGATAGATTCGCAGAGCTCCAGGAACAGGATAGAGTCTATGATTATGCTACCTACAATGATTTGGGATGTCCAGATCTCAAAAAGAGGCTTGCCCGTCCTACTCTTGGAGGATCTTCCGAATATCCTTACCCTCGTAGAGGAAGAACTAGCAGGCCACCCTCTAAATCAGATCCTAACACTGAGAGTAGGCTTCTTCCTGGAGTTCAGAACTTCGATATCTATGTTCCAAGAGATGAACGATTTGGTCACCTTAAGTTTTCGGACTTTCTGACCTATTTTCTGAAATCTATTTCTCAAGATTTGAGGCCATTGTTAGAATCGGCATTCAATTTCACGTCCAATGAGTTCAACAGCTTTGATGAAGTCCGCGAACTCTATGAAGGTGGATTTCAACTGCCTCAGGATGTACTAAAGAATACCAGCGAGAAAATTCCTTTACGTATGCTCAAGGAACTCTTCCGAACTGATGATGAAGTAGCTATCAGATATCCTACGCCTAAAGTTATTAAAGAAAACAAGTCTGGATGGATGACTGATGAAGAATTTGCAAGAGAAACGTTGGCCGGTGTGAATCCAGGTGTAATCCGGGCCATCCAAGAGTTTCCCCCAAAGAGCACGCTGGATATTAGGCTCTATGGTGATCAAACGAGCAAGATAACCAAAGAGCAGCTGGAGCAAAATATGGGGGGAGTGACAGTGGTTGAGGCACTCCAAAGCAGGAGATTGTTCATATTAGATCACCATGATGCATTCATGCCATATCTGAGGAAGATAAACAAAACTTCAAACAAAGCTTATGCCACTAGGACGATCCTTTTCTTGAAGGAGGATGGGACTTTGAAGCCATTGGCTATTGAATTAGGTTTACCCCATCCTGATGGAGATAAATGCGGCTTTATAAGTAGTGTTGTCTTGCCTGCAGATCAAGGGGTTGAGGGTACCATTTGGCTATTAGCCAAAGCTTATGTGACTGTAAATGACTCTAGCTATCATCAACTTGTTAGCCACTGGCTAAAAACTCATGCAGTCATTGAGCCATTTATCATAGCAACTAACAGGCAGCTCAGTGCTCTTCATCCTATTCATAAACTTCTCCATCCTCATTTCCGTGACACGATGAATATAAATGCTCTTGCTCGACAAGCCTTGATCAATGCAGATGGAATTATAGAGTTGTCATTCTTACCCGGACAATACTCGATCGAGATGTCGTCCAAGGTTTACAAGAACTGGGTTTTCCCTGATCAAGCCCTTCCCAAAGATCTTATCAAAAGAGGAATGGCTGTCGAGGATTCAGAATGTCTTTATGGGCTTCGCCTGGTGATAGAGGACTACCCTTTTGCTGTGGATGGACTTGAGATATGGGCTGCTATTAATACATGGGTTCATGACTATGTTCACTGCTACTATGACAGCGACGATGATGTTCAACAAGACTCTGAACTACAAGCTTGGTGGAAAGAAATTGTAGGAGTTGGTCACGGAGATTTAAAAGATCAGCCTTGGTGGTTTAAGATGCAAACTCGTGCGGAGCTTATTGAAGCATGCACTATCATCATATGGACTTCTTCAGCCCTGCATGCAGCTGTCAATTTCGGGCAATATCCTTATGGAGGTTATATTGTAAACCGTCCAACTCTTAGCAGGAGGTTGCTTCCCTTAGAAGGTAGTCCAGAATATGAAGAGCTAGAGAAGAACCCAGAGAAAGCTTTGTTGAAGACAATAACACCAAAGTTGCAGACCCTTATTGACCTTTCAGTTATAGAAATCTTATCAAGGCACGCTTCTGATGAGGTGTATCTTGGGACAAGGGACAATCCTAACTGGACTTGTGACGTGAAGCCATTGGAAGCCTTCGAGAAGTTCGGGAAGAAGTTGGAAGAGATTGAGAAAAAACTGATAGAAAGGAACAACACAGAGACCCTAAGAAACAGGAGTGGGCCAGTCAATATGCATTACACTCTTCTGTATCCTACAAGTGAGGAAGGACTCACCTGCAGAGGAATTCCAAATAGTATCTCTATCTGA 2553 0.4316 MLCFVQYLKSSWELFESFVEHIKLNWSTHYIMKFTMHSMDQEEPLFPQLFENLQNXNGLGKLGDAAALEPFVSTLPPLLEGQKAFIVQFDYTHDFGVPGAFVIRNNLLTEFYLVSLTLDGIPHHGSVHFVCNSWIYPANRYRSDRIFFANKAYLPSKTPPALAKYREQELITLRGDRFAELQEQDRVYDYATYNDLGCPDLKKRLARPTLGGSSEYPYPRRGRTSRPPSKSDPNTESRLLPGVQNFDIYVPRDERFGHLKFSDFLTYFLKSISQDLRPLLESAFNFTSNEFNSFDEVRELYEGGFQLPQDVLKNTSEKIPLRMLKELFRTDDEVAIRYPTPKVIKENKSGWMTDEEFARETLAGVNPGVIRAIQEFPPKSTLDIRLYGDQTSKITKEQLEQNMGGVTVVEALQSRRLFILDHHDAFMPYLRKINKTSNKAYATRTILFLKEDGTLKPLAIELGLPHPDGDKCGFISSVVLPADQGVEGTIWLLAKAYVTVNDSSYHQLVSHWLKTHAVIEPFIIATNRQLSALHPIHKLLHPHFRDTMNINALARQALINADGIIELSFLPGQYSIEMSSKVYKNWVFPDQALPKDLIKRGMAVEDSECLYGLRLVIEDYPFAVDGLEIWAAINTWVHDYVHCYYDSDDDVQQDSELQAWWKEIVGVGHGDLKDQPWWFKMQTRAELIEACTIIIWTSSALHAAVNFGQYPYGGYIVNRPTLSRRLLPLEGSPEYEELEKNPEKALLKTITPKLQTLIDLSVIEILSRHASDEVYLGTRDNPNWTCDVKPLEAFEKFGKKLEEIEKKLIERNNTETLRNRSGPVNMHYTLLYPTSEEGLTCRGIPNSISI 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0397 850 PRINTS Lipoxygenase signature 526 546 IPR013819 GO:0016702|GO:0046872
Acco07g0397 850 PRINTS Lipoxygenase signature 506 523 IPR013819 GO:0016702|GO:0046872
Acco07g0397 850 PRINTS Lipoxygenase signature 488 505 IPR013819 GO:0016702|GO:0046872
Acco07g0397 850 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 52 153 IPR036392 GO:0005515
Acco07g0397 850 Pfam Lipoxygenase 162 833 IPR013819 GO:0016702|GO:0046872
Acco07g0397 850 Gene3D PLAT/LH2 domain 20 153 - -
Acco07g0397 850 FunFam Lipoxygenase 485 849 - -
Acco07g0397 850 ProSiteProfiles PLAT domain profile. 28 149 IPR001024 GO:0005515
Acco07g0397 850 Gene3D - 260 349 IPR027433 -
Acco07g0397 850 PANTHER LIPOXYGENASE 53 850 IPR000907 GO:0016702|GO:0034440|GO:0046872
Acco07g0397 850 SMART LH2_4 30 150 IPR001024 GO:0005515
Acco07g0397 850 ProSitePatterns Lipoxygenases iron-binding region signature 2. 533 543 IPR020834 GO:0016702|GO:0046872
Acco07g0397 850 Gene3D - 350 483 - -
Acco07g0397 850 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 152 850 IPR013819 GO:0016702|GO:0046872
Acco07g0397 850 MobiDBLite consensus disorder prediction 208 239 - -
Acco07g0397 850 PRINTS Plant lipoxygenase signature 184 200 IPR001246 GO:0016491
Acco07g0397 850 PRINTS Plant lipoxygenase signature 375 394 IPR001246 GO:0016491
Acco07g0397 850 PRINTS Plant lipoxygenase signature 336 352 IPR001246 GO:0016491
Acco07g0397 850 PRINTS Plant lipoxygenase signature 441 465 IPR001246 GO:0016491
Acco07g0397 850 PRINTS Plant lipoxygenase signature 763 777 IPR001246 GO:0016491
Acco07g0397 850 PRINTS Plant lipoxygenase signature 119 137 IPR001246 GO:0016491
Acco07g0397 850 PRINTS Plant lipoxygenase signature 217 236 IPR001246 GO:0016491
Acco07g0397 850 PRINTS Plant lipoxygenase signature 288 309 IPR001246 GO:0016491
Acco07g0397 850 PRINTS Plant lipoxygenase signature 145 166 IPR001246 GO:0016491
Acco07g0397 850 SUPERFAMILY Lipoxigenase 154 850 IPR036226 -
Acco07g0397 850 Gene3D - 484 849 - -
Acco07g0397 850 FunFam Lipoxygenase 350 483 - -
Acco07g0397 850 Gene3D - 154 259 - -
Acco07g0397 850 Pfam PLAT/LH2 domain 59 148 IPR001024 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0397 Acco-ChrAcco07 4713494 4722107 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0397 60 850 Acyl Lipid Metabolism Gene Families AT1G55020 62.295 0.0 1041