Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0396 ATGGGAAATCAAAAGCACAAGTGGACCGCCGATGAAGAAGAAGCTTTGCTCGCCGGCATTAACAAGCATGGCCACGGCAAGTGGAAGAATATCCTCAAAGATCCCGAATTTGCCCACGTTCTCACTCACCGTTCCAATATCGATCTTAAGGATAAATGGAGAAATTTAAGTGTTGGTACTCCTCCTCAAGGAGGATCTAAAGAAAAAGCAAAGAATGTGACGATTAAGACTACGGAACCTGCTACACCTGCGGGCACGCAAAATGCTTCTGTTGCTACTCCACTTCGTCAATGTGCTTCTTCTGATGCCGTCACAGATGATTCTTCTCACAATGTACAGGAGGTCAAACAAGCTCCACAGTACGATGCAATGATTTTTGAAGCCCTATCAACATTGAGAGATTCCAATGGATCTAACCTAAATGCTATTGTTAGCTTTATTGAGCAAAAGCATGAGGTTCCTCAAAATTACAGACGAGCAGTAGGTGCAAGGTTGAGAAAGCTTGTTGCTCAAGGCAAAATTGAAAAGGTACAAAATTGTTACAGGATAAAGACACCTGTGGAGACAAAACCACCTGCACCAGAACAAATTGATTCCAGGCCACACCAATCACTGCCCTCAGGCATTACGACATCTCATGAGTCGAGCGCCTTCAGTGTTCAATTCTACGACACTTACGACTTTGGAGTTCCTGGAGCCTTCGTCATCAAAAACGATCTTTCTACCGAATTCTATCTCGTGAGCTTGACGCTTGATTATATCCCAAATCATGGATCCGTCCATTTTGTTTGCAACTCCTGGATCTACCCTGCCCACAGATACAGGAACGATCGCGTCTTCTTCGCCAACAAGGCGTATGTTCCGAGCAAAACACCTCCGGCTTTGGCCAAATACAGAGAACAAGAGCTTATTACTTTAAGAGGAGATAGATTCGCAGAGCTCCAGGAACAGGATAGAGTCTATGATTATGCTACCTACAATGATTTGGGATGTCCAGATCTCAAAAAGAGGCTTGCCCGTCCTACTCTTGGAGGATCTTCCGAATATCCTTACCCTCGTAGAGGAAGAACTAGCAGGCCACCCTCTAAATCAGATCCTAACACTGAGAGTAGGCTTCTTCCTGGAGTTCAGAACTTCGATATCTATGTTCCAAGAGATGAACGATTTGGTCACCTTAAGTTTTCGGACTTTCTGACCTATTTTCTGAAATCTATTTCTCAAGATTTGAGGCCATTGTTAGAATCGGCATTCAATTTCACGTCCAATGAGTTCAACAGCTTTGATGAAGTCCGCGAACTCTATGAAGGTGGATTTCAACTGCCTCAGGATGTACTAAAGAATATCAACGAGAAATTTCCTTTACCTATGCTCAAGGAACTCTTCCGAACTGATGGTGAACAAGCTCTCAGATATCCTACGCCTAAAGTTATTAAAGATCAAGGGGTTGAGGGTACCATTTGGCTATTAGCCAAAGCTTATGTGACTGTAAACGACTCTGGCTATCATCAACTTGTTAGCCACTGGCTACAGACTCATGCAGTCATTGAGCCATTTATCATAGCAACTAACAGGCAGCTCAGTGTTCTTCATCCTATTCATAAACTTCTCCATCCTCATTTCCGTGACACGATGAATATAAATGCTCTTGCTCGACAAGCCTTGATCAATGCAGATGGAATTATAGAGTTGTCATTCTTGCCCGGACAATACTCGATAGAGATGTCTTCCAAGGTTTACCAGAACTGGGTTTTCCCTGATCAAGCCCTACCCAAAGATCTTATCAAAAGGATTCAGAATGTCCTCACGGGCTTCGCCTGCGATGAAGATGTTCAACAAGACTCTGAACTACAAGCTTGGTGGAAAGAAATCGTAGAAGTTGGTCACGGAGATTTAAAAGATCAGCCTTGGTGGTTTAAGATGCAAACTCGTGCGGAGCTTATTGAAGCATGCACTATCATCATATGGACTTCTTCAGCCCTGCATGCAGCTGTCAATTTCGGGCAATATCCTTATGGAGGTTATATTGTAAACCGTCCAACTCTTAGCAGGAGGTTGCTTCCTTTAGAAGGAACTCCAGAATATGAAGAGCTAGAGAAGAACCCAGAGAAAGCTTTGTTGAAGACAATAACACCAAAGTTGCAGACCCTTATTGACCTTTCAGTTATAGAAATCTTATCAAGGCACGCTTCTGATGAGGTGTATCTTGGGACAAGGGACAATCCTAACTGGACTTGTGACGTGAAGCCATTGGAAGCCTTCGAGAAGTTCGGGAAGAAGTTGGAAGAGATTGAGAAAAAACTGATAGAAAGGAATAACACAGAGACCCTAAGAAACAGGATTGGGCCAGTCAACATGCATTACACTCTTCTGTATCCTACAAGTGAGGAAGGACTCACCTGCAGAGGAATTCCAAATAGTATCTCTATCTGA 2430 0.4337 MGNQKHKWTADEEEALLAGINKHGHGKWKNILKDPEFAHVLTHRSNIDLKDKWRNLSVGTPPQGGSKEKAKNVTIKTTEPATPAGTQNASVATPLRQCASSDAVTDDSSHNVQEVKQAPQYDAMIFEALSTLRDSNGSNLNAIVSFIEQKHEVPQNYRRAVGARLRKLVAQGKIEKVQNCYRIKTPVETKPPAPEQIDSRPHQSLPSGITTSHESSAFSVQFYDTYDFGVPGAFVIKNDLSTEFYLVSLTLDYIPNHGSVHFVCNSWIYPAHRYRNDRVFFANKAYVPSKTPPALAKYREQELITLRGDRFAELQEQDRVYDYATYNDLGCPDLKKRLARPTLGGSSEYPYPRRGRTSRPPSKSDPNTESRLLPGVQNFDIYVPRDERFGHLKFSDFLTYFLKSISQDLRPLLESAFNFTSNEFNSFDEVRELYEGGFQLPQDVLKNINEKFPLPMLKELFRTDGEQALRYPTPKVIKDQGVEGTIWLLAKAYVTVNDSGYHQLVSHWLQTHAVIEPFIIATNRQLSVLHPIHKLLHPHFRDTMNINALARQALINADGIIELSFLPGQYSIEMSSKVYQNWVFPDQALPKDLIKRIQNVLTGFACDEDVQQDSELQAWWKEIVEVGHGDLKDQPWWFKMQTRAELIEACTIIIWTSSALHAAVNFGQYPYGGYIVNRPTLSRRLLPLEGTPEYEELEKNPEKALLKTITPKLQTLIDLSVIEILSRHASDEVYLGTRDNPNWTCDVKPLEAFEKFGKKLEEIEKKLIERNNTETLRNRIGPVNMHYTLLYPTSEEGLTCRGIPNSISI 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0396 809 ProSitePatterns Lipoxygenases iron-binding region signature 2. 529 539 IPR020834 GO:0016702|GO:0046872
Acco07g0396 809 Gene3D - 481 600 - -
Acco07g0396 809 Gene3D - 601 808 - -
Acco07g0396 809 Gene3D PLAT/LH2 domain 196 286 - -
Acco07g0396 809 ProSitePatterns Lipoxygenases iron-binding region signature 1. 502 516 IPR020833 GO:0016702|GO:0046872
Acco07g0396 809 SMART sant 4 59 IPR001005 -
Acco07g0396 809 MobiDBLite consensus disorder prediction 54 73 - -
Acco07g0396 809 Pfam linker histone H1 and H5 family 119 178 IPR005818 GO:0000786|GO:0003677|GO:0006334
Acco07g0396 809 PRINTS Lipoxygenase signature 522 542 IPR013819 GO:0016702|GO:0046872
Acco07g0396 809 PRINTS Lipoxygenase signature 484 501 IPR013819 GO:0016702|GO:0046872
Acco07g0396 809 PRINTS Lipoxygenase signature 502 519 IPR013819 GO:0016702|GO:0046872
Acco07g0396 809 PRINTS Plant lipoxygenase signature 252 270 IPR001246 GO:0016491
Acco07g0396 809 PRINTS Plant lipoxygenase signature 278 299 IPR001246 GO:0016491
Acco07g0396 809 PRINTS Plant lipoxygenase signature 317 333 IPR001246 GO:0016491
Acco07g0396 809 PRINTS Plant lipoxygenase signature 350 369 IPR001246 GO:0016491
Acco07g0396 809 PRINTS Plant lipoxygenase signature 421 442 IPR001246 GO:0016491
Acco07g0396 809 PRINTS Plant lipoxygenase signature 469 485 IPR001246 GO:0016491
Acco07g0396 809 MobiDBLite consensus disorder prediction 341 372 - -
Acco07g0396 809 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 56 IPR017930 -
Acco07g0396 809 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 206 286 IPR036392 GO:0005515
Acco07g0396 809 MobiDBLite consensus disorder prediction 187 210 - -
Acco07g0396 809 SUPERFAMILY Lipoxigenase 287 809 IPR036226 -
Acco07g0396 809 Pfam PLAT/LH2 domain 216 281 IPR001024 GO:0005515
Acco07g0396 809 ProSiteProfiles Myb-like domain profile. 1 57 IPR001005 -
Acco07g0396 809 Pfam Myb-like DNA-binding domain 6 56 IPR001005 -
Acco07g0396 809 Gene3D - 393 480 IPR027433 -
Acco07g0396 809 CDD SANT_TRF 6 56 - -
Acco07g0396 809 Gene3D - 2 58 - -
Acco07g0396 809 Gene3D - 113 195 IPR036388 -
Acco07g0396 809 Pfam Lipoxygenase 604 792 IPR013819 GO:0016702|GO:0046872
Acco07g0396 809 Pfam Lipoxygenase 295 480 IPR013819 GO:0016702|GO:0046872
Acco07g0396 809 Pfam Lipoxygenase 480 596 IPR013819 GO:0016702|GO:0046872
Acco07g0396 809 SUPERFAMILY Homeodomain-like 2 58 IPR009057 -
Acco07g0396 809 Gene3D - 287 392 - -
Acco07g0396 809 FunFam Telomere repeat-binding factor 1 2 58 - -
Acco07g0396 809 SUPERFAMILY "Winged helix" DNA-binding domain 118 185 IPR036390 -
Acco07g0396 809 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 285 453 IPR013819 GO:0016702|GO:0046872
Acco07g0396 809 CDD H15 119 194 IPR005818 GO:0000786|GO:0003677|GO:0006334
Acco07g0396 809 SMART LH2_4 168 283 IPR001024 GO:0005515
Acco07g0396 809 ProSiteProfiles PLAT domain profile. 163 282 IPR001024 GO:0005515
Acco07g0396 809 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 117 185 IPR005818 GO:0000786|GO:0003677|GO:0006334
Acco07g0396 809 SMART h15plus2 115 180 IPR005818 GO:0000786|GO:0003677|GO:0006334
Acco07g0396 809 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 454 809 IPR013819 GO:0016702|GO:0046872
Acco07g0396 809 PANTHER LIPOXYGENASE 606 809 IPR000907 GO:0016702|GO:0034440|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0396 Acco-ChrAcco07 4702409 4713419 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0396 479 809 Acyl Lipid Metabolism Gene Families AT3G22400 58.445 3.02e-149 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco07g0396 Lipoxygenase 1.2e-80 No_clan