Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0362 ATGAAGTGTCCATGTAAGATAGATTTTGGCCTATGTTCTACTCATTCAACATCTCCTGATTCTCTTGGATGCTCATCATGGAAAACTTTATCTGGATTTCATGGACAAGAAGAATCACCTATATCCCAAAGCTTGAGCTTAAAAATGGGAGTTCTTCCACAACAATGTCTTAATACTAAGCTGTTTAGTTTTCCATTTCAAGAACGTTACTTATCTTCTAACCAACCAACTGATCAATCCAATCCTAAAGGTGTTTTGGCTAACTCAGGTCCTTCTGATGGAAAGTTCTTCAGAGATCTCGTCAGATCGCCTGTAGGAAGGCAGGATTTTGCCTTTCCTTCTTCACTTCTGGATCATAACAAATCAATTATTCATCATTCTCAACTAATGGGAATGGCTCCTCCACTTCGAGTTCCACTTCCACTCGACTTCACTGAAGAACCCATATTTGTGAATGCAAAACAATATCATGCAATTCTGAGGCGAAGACAGTATCGATCAAAACTCGAATCACAGAACAAGCTCAACAAAACACGGAAACCATATCTTCACAAATCTCGCCACCTACATGCACTGAAGAGAGCTAGAGGTTCTGGTGGACGCTTTCTCAACACCAAAAAGCTCCAACAATCATCATCATCAGAACTACCTCCAGCATTGAATAATCCGACTGTTACTTCACCAGAATCTGAATTTCTTGGGTTAGAAAATTGCAGAGACGGTTCAGATGTGACGAGTGCTTCTAACAGCAACAGCATCTTCCAGCAGCAACATGAATCGAATTCGAGGCTGTGTGGAAGATATCATCCTCACATTGGAAGCAATAAGCAAAGTTGCTCAGTTGATATGAATGGTGGTGATGAGAATAAGCATAGGTTATCTGTCTTTATGTGGCAGGATTTGAAAAAGGGAAGTTAA 918 0.4031 MKCPCKIDFGLCSTHSTSPDSLGCSSWKTLSGFHGQEESPISQSLSLKMGVLPQQCLNTKLFSFPFQERYLSSNQPTDQSNPKGVLANSGPSDGKFFRDLVRSPVGRQDFAFPSSLLDHNKSIIHHSQLMGMAPPLRVPLPLDFTEEPIFVNAKQYHAILRRRQYRSKLESQNKLNKTRKPYLHKSRHLHALKRARGSGGRFLNTKKLQQSSSSELPPALNNPTVTSPESEFLGLENCRDGSDVTSASNSNSIFQQQHESNSRLCGRYHPHIGSNKQSCSVDMNGGDENKHRLSVFMWQDLKKGS 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0362 305 Gene3D - 145 206 - -
Acco07g0362 305 MobiDBLite consensus disorder prediction 207 230 - -
Acco07g0362 305 PRINTS CCAAT-binding transcription factor subunit B signature 179 202 IPR001289 GO:0003700|GO:0006355
Acco07g0362 305 PRINTS CCAAT-binding transcription factor subunit B signature 148 170 IPR001289 GO:0003700|GO:0006355
Acco07g0362 305 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 147 202 IPR001289 GO:0003700|GO:0006355
Acco07g0362 305 ProSiteProfiles NF-YA/HAP2 family profile. 145 205 IPR001289 GO:0003700|GO:0006355
Acco07g0362 305 SMART cbf3 144 205 IPR001289 GO:0003700|GO:0006355
Acco07g0362 305 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 92 262 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0362 Acco-ChrAcco07 4135154 4137604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0362 6 297 CCAAT-HAP2 Transcription Factor Family AT1G17590 36.176 1.71e-40 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Acco07g0362 CBFB_NFYA 1.9e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g1648 09 32860932 32867494 Acco07g0362 07 4135154 4137604 CCT
Acco07g0362 07 4135154 4137604 Acco07g0362 07 4135154 4137604 ECH