Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0345 ATGGGAAGGAGTCCTTGCTGTGCAAAGGAAGGTATGAACAGAGGAGCATGGACAGCCATTGAAGACAAGATTCTCATTGATTACATTAAGATTCACGGCGAAGGAAAATGGAGACACCTTCCCAAAAGAGCAGGTCTGAAGAGATGTGGGAAGAGTTGTAGGCTGAGATGGTTAAATTATCTAAGACCTGATATCAAAAGAGGAAATATTACTCGTGACGAAGAGGATCTCATTATCAGACTTCACAATCTTCTTGGAAACAGGTGGTCTTTGATAGCTGGACGACTACCAGGACGAACAGACAATGAAATAAAGAATTATTGGAACACCAACATCGGAAAGAAGCTTCAAAATAATGGTAACTCAAAAACAAAGTCCTCTCCCACTTCAAGCGGCTCGCCCCCAAGCCGAGCCAGACAGGACAAGGACCCGGACCCAAAAGCCCCCCAAAAAACGGCCGGTTCATGCTTGGTACGAACAAAAGCAACAAGGTGCACCAAAGTGATAGTGAGCAGAGAAATCCAACCATTAAAGGCCGTACCATGTTTGACCATTTATGATGAGGGCGAGAAAGTTAGGCGTGATCATGATGAGAAAATAATGGAGGCACCATTACCCCCTTTTGTGGATTCTGAGGGAAATAACCTTAATAATAATGATGATGACGAAAATAATAATACAAACAACGAATTAGATTTCATGGCCGATTTCGAAATGGATGAGGGCTTCTTTTCGGATCTTCTGAATATGGATATATCCCAACCGGCATCTTGTTTTGAGAACAAGGTCGTAGTGAAGGAGGAAGACCACACTAATCGCAAAGTTACTACTAGTGAAGGTGGTGTTCATCAACATTTGTCTTCACCAGTAGTATCTAATGACGACACCTACTTGAATAATAATAACACTAATGTTTCTGAGGATTCCTTGCATGAAGCTGAGGATTTTCAGTCAATGTCAGCATTGATGGAGAATGAATTTGATTGGCTTTGA 993 0.4189 MGRSPCCAKEGMNRGAWTAIEDKILIDYIKIHGEGKWRHLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNITRDEEDLIIRLHNLLGNRWSLIAGRLPGRTDNEIKNYWNTNIGKKLQNNGNSKTKSSPTSSGSPPSRARQDKDPDPKAPQKTAGSCLVRTKATRCTKVIVSREIQPLKAVPCLTIYDEGEKVRRDHDEKIMEAPLPPFVDSEGNNLNNNDDDENNNTNNELDFMADFEMDEGFFSDLLNMDISQPASCFENKVVVKEEDHTNRKVTTSEGGVHQHLSSPVVSNDDTYLNNNNTNVSEDSLHEAEDFQSMSALMENEFDWL 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0345 330 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 248 - -
Acco07g0345 330 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Acco07g0345 330 MobiDBLite consensus disorder prediction 272 297 - -
Acco07g0345 330 CDD SANT 16 61 IPR001005 -
Acco07g0345 330 Gene3D - 70 143 - -
Acco07g0345 330 MobiDBLite consensus disorder prediction 112 155 - -
Acco07g0345 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Acco07g0345 330 FunFam Transcription factor TT2 70 140 - -
Acco07g0345 330 MobiDBLite consensus disorder prediction 112 137 - -
Acco07g0345 330 FunFam MYB-related transcription factor 13 66 - -
Acco07g0345 330 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Acco07g0345 330 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Acco07g0345 330 Gene3D - 14 66 - -
Acco07g0345 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Acco07g0345 330 MobiDBLite consensus disorder prediction 204 225 - -
Acco07g0345 330 CDD SANT 71 112 IPR001005 -
Acco07g0345 330 SMART sant 13 63 IPR001005 -
Acco07g0345 330 SMART sant 66 114 IPR001005 -
Acco07g0345 330 MobiDBLite consensus disorder prediction 277 297 - -
Acco07g0345 330 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Acco07g0345 330 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Acco07g0345 330 MobiDBLite consensus disorder prediction 211 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0345 Acco-ChrAcco07 3910460 3912556 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0345 1 149 MYB Transcription Factor Family AT4G38620 65.101 8.09e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco07g0345 Myb_DNA-binding 6.1e-14 CL0123