Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0342 ATGGGAAGGAGTCCTTGCTGTGCAAAGGAAGGTTTGAATAGAGGAGCATGGACTGCTGCTGAAGACAAGATTCTCACTAACTACATTAAGATTCATGGTGAAGGAAAATGGCGACACCTTCCCAAAAGAGCAGGTCTGAAGAGATGTGGGAAGAGTTGTAGGCTGAGATGGTTAAATTATTTAAGATCTGATATCAAAAGAGGAAATATTACTCGTGACGAAGAGGATCTCATTATCAGACTTCACACTCTTCTTGGAAATAGGTGGTCTTTGATAGCTGGGCGACTACCGGGACGTACAGACAATGAAATAAAGAACTATTGGAACACCGACATCGGAAAGAAGCTTCCAAATGGGGATAAAGAACTTGGCTCCTCCTCAAGTTTAGCCGGGAGAGACTCCGACCTCGATCCGGATCCCGAGCCTGGCTTAAAGCCCCCACAAAAAACGACGTCGTCTGGTCCATGCTTGATTCGAACCAAAGCAACAAGGTGCACCAAGGTGATACTGAGCCAAGAACTCCAACCATTAATAGCTGCATCACAATGTTCAACTCATAATAACAATGACATTCACATAAAAATAGAGGCTCCGTCACCTTTCGTGGATTCTGAGGGACTTACAAACAACAACGTTTTGGATTTCATGGTGGATAATTTTGAGATTGACGAGAATGTCTTTTCAGATCTTATGAATATGGAACTACCGTCTTTTTTTGAGAAAAAAGTTGTAGCAACGGAAGCAGCAGCAGCAGAAAACAGTGGTGGTGACCAACAAGGTTGTTATCATTTGTGTCCTCATCCCATTTCTAATAATGAAACCTGCTTCATTAATAATGTTTCCGATGATTCAATTTTGCGTAGCTCCGACGTTTTTCAATCAATGTCGGCTCTCATGGAGAACGAATTCGACTGGCTTTGA 921 0.4256 MGRSPCCAKEGLNRGAWTAAEDKILTNYIKIHGEGKWRHLPKRAGLKRCGKSCRLRWLNYLRSDIKRGNITRDEEDLIIRLHTLLGNRWSLIAGRLPGRTDNEIKNYWNTDIGKKLPNGDKELGSSSSLAGRDSDLDPDPEPGLKPPQKTTSSGPCLIRTKATRCTKVILSQELQPLIAASQCSTHNNNDIHIKIEAPSPFVDSEGLTNNNVLDFMVDNFEIDENVFSDLMNMELPSFFEKKVVATEAAAAENSGGDQQGCYHLCPHPISNNETCFINNVSDDSILRSSDVFQSMSALMENEFDWL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0342 306 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 161 - -
Acco07g0342 306 FunFam MYB-related transcription factor 13 66 - -
Acco07g0342 306 CDD SANT 16 61 IPR001005 -
Acco07g0342 306 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Acco07g0342 306 Gene3D - 14 66 - -
Acco07g0342 306 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Acco07g0342 306 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Acco07g0342 306 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Acco07g0342 306 SMART sant 13 63 IPR001005 -
Acco07g0342 306 SMART sant 66 114 IPR001005 -
Acco07g0342 306 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Acco07g0342 306 MobiDBLite consensus disorder prediction 118 156 - -
Acco07g0342 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Acco07g0342 306 CDD SANT 71 110 IPR001005 -
Acco07g0342 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Acco07g0342 306 Gene3D - 69 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0342 Acco-ChrAcco07 3875564 3877351 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0342 1 118 MYB Transcription Factor Family AT2G47460 72.881 1.79e-60 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco07g0342 Myb_DNA-binding 1.1e-13 CL0123