Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0341 ATGGCTTGTAGGAGTGATGATAATAGGAGCAAAGTGATGAAGTCAAATGATGCTATGAAGAAAGTAGCTATTAGCAAAGGAGCTTGGACACTAGAGGAAGATAGGAAACTAGCTGAGGTTATTGCAATTCATGGGGCCAAGAAGTGGAAGTCCATCGCTGCAAAATCTGGCCTTAATCGTGGAGGTAAGAGTTGTAGGCTTAGATGGTTGAACTATCTTAGGCCCAACATCAAGAGAGGAAACATATCAGAACAAGAAGAGGATTTGATACTTCGACTTCATAAACTGCTTGGAAATAGATGGTCTTTAATTGCGGGAAGGCTGCCGGGAAGAACAGACAATGAGATAAAGAACTACTGGAATTCTCACTTGTGCAAGAAGATAAGACAGAATGAGCAGCAAAAAAGTGGGAGTTCAACAAGACAAGATCAGAAACAAAGAGTTGTATTAGAGGAATCAATTCCTGAAGAGAATTATAGAGTGCGAGTTGATGACGAAGACACATCGAAAGAATTCAATTTTGATGATAATGTGAATGGGTTCTTTGACATGTCCAATGATGAAGAAGGTCATCATATATTGAACCTGGAGTGGGTTAATGAATTCCTTGAACTTGATGAGGCCACTCTTGGACTTTTCTCACAATAA 648 0.3966 MACRSDDNRSKVMKSNDAMKKVAISKGAWTLEEDRKLAEVIAIHGAKKWKSIAAKSGLNRGGKSCRLRWLNYLRPNIKRGNISEQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLCKKIRQNEQQKSGSSTRQDQKQRVVLEESIPEENYRVRVDDEDTSKEFNFDDNVNGFFDMSNDEEGHHILNLEWVNEFLELDEATLGLFSQ 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0341 215 FunFam MYB-related transcription factor 25 78 - -
Acco07g0341 215 ProSiteProfiles Myb-like domain profile. 21 73 IPR001005 -
Acco07g0341 215 CDD SANT 28 73 IPR001005 -
Acco07g0341 215 CDD SANT 83 124 IPR001005 -
Acco07g0341 215 ProSiteProfiles Myb-like domain profile. 74 124 IPR001005 -
Acco07g0341 215 SMART sant 25 75 IPR001005 -
Acco07g0341 215 SMART sant 78 126 IPR001005 -
Acco07g0341 215 Pfam Myb-like DNA-binding domain 26 73 IPR001005 -
Acco07g0341 215 Pfam Myb-like DNA-binding domain 79 124 IPR001005 -
Acco07g0341 215 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 73 IPR017930 -
Acco07g0341 215 SUPERFAMILY Homeodomain-like 24 120 IPR009057 -
Acco07g0341 215 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 128 IPR017930 -
Acco07g0341 215 Gene3D - 81 152 - -
Acco07g0341 215 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 13 156 - -
Acco07g0341 215 FunFam Transcription factor TT2 82 152 - -
Acco07g0341 215 Gene3D - 26 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0341 Acco-ChrAcco07 3858762 3860046 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0341 1 214 MYB Transcription Factor Family AT3G13540 39.004 2.04e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco07g0341 Myb_DNA-binding 1.4e-16 CL0123