Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0340 ATGGCTTCTGAGAGTGATAATTGTAATAAGAGGAAAGTGAAGCCGATTAAAGCCATGATAAATGTGCCTCTTAGTAAAGCAGCATGGACACCTGAAGAAGATAGGAAACTAGCTGAGGCTATTTCAGTTTATGGCGCCAAAAAGTGGAAGTCCATTGCATCCAAAGCAGGACTTGATCGGTGTGGTAAGAGTTGTAGGTTGAGATGGTTAAACTATCTCAGACCGAACATCAAGAGGGGAAACATATCAGCCCAGGAAGAGGATTTGATTTTTCGCCTTCATAAACTCCTTGGAAACAGGTGTTGTCACAGATTATAA 318 0.4151 MASESDNCNKRKVKPIKAMINVPLSKAAWTPEEDRKLAEAISVYGAKKWKSIASKAGLDRCGKSCRLRWLNYLRPNIKRGNISAQEEDLIFRLHKLLGNRCCHRL 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0340 105 FunFam MYB-related transcription factor 25 78 - -
Acco07g0340 105 CDD SANT 28 73 IPR001005 -
Acco07g0340 105 SUPERFAMILY Homeodomain-like 28 100 IPR009057 -
Acco07g0340 105 ProSiteProfiles Myb-like domain profile. 21 73 IPR001005 -
Acco07g0340 105 PANTHER MYB DOMAIN PROTEIN 55 1 100 - -
Acco07g0340 105 Gene3D - 27 78 - -
Acco07g0340 105 SMART sant 25 75 IPR001005 -
Acco07g0340 105 Pfam Myb-like DNA-binding domain 28 73 IPR001005 -
Acco07g0340 105 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 77 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0340 Acco-ChrAcco07 3839825 3840295 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0340 26 100 MYB Transcription Factor Family AT5G40330 62.667 6.91e-31 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco07g0340 Myb_DNA-binding 1.2e-17 CL0123