Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0338 ATGACAAGAAAAGGCAATAGCCCTGAGAGTAATAATTGTATTAAGAGGAGGGTGAAACCAGCTGAAGCCATGAGAAATGTGCCTCTAAGTAAATCAGCATGGACGCCAGAAGAAGATAAAAAACTAGCTGAGGTTATTGCAGTTCATGGGGCAAAAAGGTGGAAGTCCATTGCATCCAAAGCAGGTCTTAATCGGTGTGGTAAGAGTTGTAGGTTGAGATGGATGAACTATCTCAGGCCCAACATTAAGAGGGGAAATATATCTGACCAAGAAGAGGATTTGATTCTTCGCCTTCATAAACTCCTTGGAAACAGGTGGTCTTTAATCGCCGGGAGACTACCAGGCCGAACAGATAATGAGATAAAGAACTATTGGAATTCTCATTTGAGCAAGAAGATAGAGCACAAGAAGAAGGAATCAAGTGGGAGTTCAACAATAAGACAAGGCAACCAACAAAAAGTGGTAGTAGAACAGAGAATTCCTGGAGAAGAGGAAGAAGCTAAGCAAATCAGAAAAGAGATTTCAATAGAGGAAGCTGAAGAAGACTCATCAATAAAACGGAGTCTTAATGTGGACGGCTTCTTTGATTTTTCCGTAGAGGAAGGTCCATTGAATTTGGAGTGGGTTAGTCAGTTCCTTGAACTTGATGAAACAACTCTTGGACTCTTCTCACAATAA 678 0.41 MTRKGNSPESNNCIKRRVKPAEAMRNVPLSKSAWTPEEDKKLAEVIAVHGAKRWKSIASKAGLNRCGKSCRLRWMNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKIEHKKKESSGSSTIRQGNQQKVVVEQRIPGEEEEAKQIRKEISIEEAEEDSSIKRSLNVDGFFDFSVEEGPLNLEWVSQFLELDETTLGLFSQ 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0338 225 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 78 IPR017930 -
Acco07g0338 225 Gene3D - 87 160 - -
Acco07g0338 225 Gene3D - 32 83 - -
Acco07g0338 225 SMART sant 83 131 IPR001005 -
Acco07g0338 225 SMART sant 30 80 IPR001005 -
Acco07g0338 225 Pfam Myb-like DNA-binding domain 84 129 IPR001005 -
Acco07g0338 225 Pfam Myb-like DNA-binding domain 31 78 IPR001005 -
Acco07g0338 225 CDD SANT 88 129 IPR001005 -
Acco07g0338 225 SUPERFAMILY Homeodomain-like 29 125 IPR009057 -
Acco07g0338 225 Coils Coil 160 180 - -
Acco07g0338 225 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 79 133 IPR017930 -
Acco07g0338 225 ProSiteProfiles Myb-like domain profile. 79 129 IPR001005 -
Acco07g0338 225 ProSiteProfiles Myb-like domain profile. 26 78 IPR001005 -
Acco07g0338 225 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 25 171 - -
Acco07g0338 225 FunFam MYB-related transcription factor 30 83 - -
Acco07g0338 225 CDD SANT 33 78 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0338 Acco-ChrAcco07 3785401 3786817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0338 31 133 MYB Transcription Factor Family AT5G40330 70.874 9.92e-53 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco07g0338 Myb_DNA-binding 1e-18 CL0123