Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0337 ATGAGCGACTGGATGGGTTTTTCTCTGACTCCACACTTGAGGATTGATGAAGTGTATGGGAATGGCAGAGAAAACCAAGAAGAAGAACACCGTGGAGGCTATCCTCATCCTTCTCATCATCCTCGCTTGTCGGTTATGCCTTTAAGATCAGATGGCTCTCTCTGTGTTGCTGAAAACCCTTTTAGGCACTCTGGTGCACCTGAAGAATGGAGGTATGATAATGGTGTAGGAGGGGGTAGCTCCAATGAAGAAGGTCCAAAGCTTGAAGATTTCTTGGGTTGTTACTCAAACTCATCTGATATTGCTGAAACGAAAGTGTATTGCCAAGGCAATACACAACAAGAAGACCAAGACGAAGACCAGAACCAGAACCAGAATCAGAACAGCCTTTCCAGCAGAATCAATGTGAATGTGGCCCCAAGCTTCAGCACCAACACTGAGATGGAAGCTAATGGGGAAAATTTCACAAACCCACCTTCCTTAATCCAATCTTTTCATGCATACTGTGATGGCAACCAAAGAGCTTTGATCCCAAATAATGGCATGTACAAATCCTGGTTGGCTCAATCTCAATCTTCTGCTGAAGTAAATGGTTATAACTACCAATCTCTTGCCCTAACTATGAGTCCTAGTGTACCAAACACTCTTTGTGGTGCAATTTCACCTGTTCAAGTGGTGGAAGATGATGCTCGTAAAAGGTCAATGACGAAATCTCTTGCTGCTAGAGAACCTGTGCCTCGCAAATCTATTGATACCTTTGGTCAAAGAACATCTCAATATAGAGGTGTTACAAGGCATAGATGGACTGGGAGATATGAGGCCCATTTGTGGGATAATAGTTGCAGGAAGGAGGGGCAAACAAGGAAAGGAAGGCAAGGTGGTTATGATAAGGAAGAAAAAGCGGCAAGGGCTTATGACTTAGCTGCGCTAAAGTATTGGGGTCCAACTACTCATATAAATTTCCCTCTAAGCACATACGAGAGGGAACTTGAAGAGATGAAACACATGACTAGGCAAGAATTTGTGGCCAATCTAAGGAGGAAGAGCAGTGGATTTTCAAGAGGTGCTTCTGTGTATAGGGGCGTGACAAGACACCATCAACATGGAAGGTGGCAAGCTAGGATTGGTAGAGTTGCAGGAAACAAAGACTTGTATCTCGGCACACAAGAGGAAGCTGCAGAAGCATACGACATTGCAGCAATCAAGTTCAGGGGAACAAGTGCCGTGACCAACTTTGATATAAGTAGGTATGATGTGAAGAGAATATGCTCGAGCTCGACACTCATCGCCGGAGATCTGGCGAAGAAGTCCCCGAAAGAGTTAGGTCCCTGTGTGATTGCCGCCACAACCAGCGAGGTGGTTGATCAGCAACAGCCACAGCCCTTTTTGGCGGTAACAAATGTCGAGCACTCATCTGATGAGTTGGCCAACATGGTTTGGAATGATGATGGAAACCTCAATGAGAAACAGGTGAACGATCACAGTATTTCCGATAACAGCAAGAATAATAATGATAATGCTAAGAATGCGTCAAACTCAGAAGGAAGTCCCAAGTGTTCTGTGGGAATGGGAAATGAGTTTGGGGTGAGTGGTACTTCAGAGTTTGGACATGGGTTCTTCTCGTTGCAGGGACCAAAGTATAACGATAATGATGACGACGATGATGGGAACAACGACGACGACAACAACGGTAATGATAACATGAATAATGACAACAATCGCATTGGGAACATGGGTCTGGTTCATCAAGTTCCTATGTTTGCTTTGTGGAATGAATGA 1779 0.4458 MSDWMGFSLTPHLRIDEVYGNGRENQEEEHRGGYPHPSHHPRLSVMPLRSDGSLCVAENPFRHSGAPEEWRYDNGVGGGSSNEEGPKLEDFLGCYSNSSDIAETKVYCQGNTQQEDQDEDQNQNQNQNSLSSRINVNVAPSFSTNTEMEANGENFTNPPSLIQSFHAYCDGNQRALIPNNGMYKSWLAQSQSSAEVNGYNYQSLALTMSPSVPNTLCGAISPVQVVEDDARKRSMTKSLAAREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQGGYDKEEKAARAYDLAALKYWGPTTHINFPLSTYERELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTQEEAAEAYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTLIAGDLAKKSPKELGPCVIAATTSEVVDQQQPQPFLAVTNVEHSSDELANMVWNDDGNLNEKQVNDHSISDNSKNNNDNAKNASNSEGSPKCSVGMGNEFGVSGTSEFGHGFFSLQGPKYNDNDDDDDGNNDDDNNGNDNMNNDNNRIGNMGLVHQVPMFALWNE 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0337 592 Gene3D AP2/ERF domain 358 415 IPR036955 GO:0003700|GO:0006355
Acco07g0337 592 Gene3D AP2/ERF domain 258 324 IPR036955 GO:0003700|GO:0006355
Acco07g0337 592 PRINTS Ethylene responsive element binding protein signature 395 415 IPR001471 GO:0003700|GO:0006355
Acco07g0337 592 PRINTS Ethylene responsive element binding protein signature 260 271 IPR001471 GO:0003700|GO:0006355
Acco07g0337 592 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 82 498 - -
Acco07g0337 592 ProSiteProfiles AP2/ERF domain profile. 259 322 IPR001471 GO:0003700|GO:0006355
Acco07g0337 592 ProSiteProfiles AP2/ERF domain profile. 358 413 IPR001471 GO:0003700|GO:0006355
Acco07g0337 592 MobiDBLite consensus disorder prediction 562 577 - -
Acco07g0337 592 MobiDBLite consensus disorder prediction 111 135 - -
Acco07g0337 592 SUPERFAMILY DNA-binding domain 258 324 IPR016177 GO:0003677
Acco07g0337 592 SUPERFAMILY DNA-binding domain 357 415 IPR016177 GO:0003677
Acco07g0337 592 MobiDBLite consensus disorder prediction 484 519 - -
Acco07g0337 592 SMART rav1_2 358 419 IPR001471 GO:0003700|GO:0006355
Acco07g0337 592 SMART rav1_2 259 328 IPR001471 GO:0003700|GO:0006355
Acco07g0337 592 MobiDBLite consensus disorder prediction 540 577 - -
Acco07g0337 592 CDD AP2 258 324 IPR001471 GO:0003700|GO:0006355
Acco07g0337 592 FunFam AP2-like ethylene-responsive transcription factor ANT 258 324 - -
Acco07g0337 592 MobiDBLite consensus disorder prediction 484 522 - -
Acco07g0337 592 Pfam AP2 domain 259 314 IPR001471 GO:0003700|GO:0006355
Acco07g0337 592 Pfam AP2 domain 357 405 IPR001471 GO:0003700|GO:0006355
Acco07g0337 592 CDD AP2 357 415 IPR001471 GO:0003700|GO:0006355
Acco07g0337 592 MobiDBLite consensus disorder prediction 64 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0337 Acco-ChrAcco07 3757583 3760932 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0337 1 442 AP2-EREBP Transcription Factor Family AT1G72570 49.167 6.89e-130 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Acco07g0337 AP2 1.2e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g0337 07 3757583 3760932 Acco07g0337 07 3757583 3760932 ECH