Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0335 ATGATAAGTGAAACTAGTGTAAGAAATAGATCTCCTTTCACTGCAATTCAATGGCAAGAACTTGAACAACAAGCTCTTGTCTTCAAATACCTGGTCTCAGGAAGTCCCATCCCACCTGATCTCATTTTATCTGTCAAAAGGAGCCTAGACTCTTCACTGTCTTCTTCTTCTTCTTCTTCTTCATCTTCTTCAAGGCTCTTCCCCTTCCATCCAATGGGATGGGGATGCCTAGAAATGGGATATGGCAGAAAAGTAGACCCAGAGCCAGGAAGGTGCAGAAGAACAGATGGCAAGAAATGGAGATGCTCAAAAGAAGCCTATCCCGACTCAAAATACTGTGAGAGGCACATGCACAGAGGCAAAAACCGTTCAAGAAAGCCTGTGGAAATTTCTTCAGCAACAGCAACAACTACTACTGGCATTTCAACAAACACATCTTCACAGTCAATAATCTCTTCATCACCATATAGTAACAGAAGCCTTACCATGATGAGCAATCCCAATCCGCACTCTTCAAGTTCTCATTTCCCTTTCTCTCTATTGTCCTCCTCTTCTATGCCCTCTGATACCCAACAACCTTATTCCCATATGTACCAAAATTCTTCTCTTAACCCCTTGTTCTACAACCACTCAACCTCATGCAGGCCTCTTGATTCTGATTTTCCGTCTCAAAAAAGCAATACCCACCAGCTATTTTTGGACTCTGGATCTTATTCTAGGGATGAGGCCTATAGGCATATTCATGGAATGAGGGAAGGTGTGGATGAGAGAGCTTTCTTCCCAGAAGGCTCAGGGAGTGTTAGGAGCTTTACTGATTCATATCAGCAATTACCATTGAGCTCCTGTAAGCCTTTTTCAAACTCTCAGTTTCAAAACATGAATGATAATCCAACTCCAAGGCAACAAGAAGAGCAGCAACATTGCTTTGTCCTGGAAAGAGACTTCAAATCACAAGGAGAAATGAAACATGATAATGAAACTGATATGACCCAAAGATCCCTTCATCATTTCTTTGGTGAATGGCCTCCAAAGAACACAGATTCCTGGCTTGATCTTGCTTCAAATTCCAGAATCCACTCCGGTAAAATGTTTTATTATCTATATAGCTTTATATGCTTATCTATATTATATATAATCTATATAGTTCTTTTCAATTTATTTAGCCTCCTTTCCTATGCAGATGAATGA 1188 0.4049 MISETSVRNRSPFTAIQWQELEQQALVFKYLVSGSPIPPDLILSVKRSLDSSLSSSSSSSSSSSRLFPFHPMGWGCLEMGYGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEISSATATTTTGISTNTSSQSIISSSPYSNRSLTMMSNPNPHSSSSHFPFSLLSSSSMPSDTQQPYSHMYQNSSLNPLFYNHSTSCRPLDSDFPSQKSNTHQLFLDSGSYSRDEAYRHIHGMREGVDERAFFPEGSGSVRSFTDSYQQLPLSSCKPFSNSQFQNMNDNPTPRQQEEQQHCFVLERDFKSQGEMKHDNETDMTQRSLHHFFGEWPPKNTDSWLDLASNSRIHSGKMFYYLYSFICLSILYIIYIVLFNLFSLLSYADE 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0335 395 MobiDBLite consensus disorder prediction 127 154 - -
Acco07g0335 395 SMART QLQ_2 11 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Acco07g0335 395 ProSiteProfiles QLQ domain profile. 12 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Acco07g0335 395 Pfam QLQ 12 45 IPR014978 GO:0005524|GO:0005634|GO:0006355
Acco07g0335 395 ProSiteProfiles WRC domain profile. 86 130 IPR014977 -
Acco07g0335 395 PANTHER GROWTH-REGULATING FACTOR 5 11 350 IPR031137 GO:0005634|GO:0006351|GO:0032502
Acco07g0335 395 Pfam WRC 87 129 IPR014977 -
Acco07g0335 395 MobiDBLite consensus disorder prediction 117 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0335 Acco-ChrAcco07 3738772 3740141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0335 10 129 GRF Transcription Factor Family AT3G13960 65.833 1.07e-55 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Acco07g0335 WRC 8.5e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g0335 07 3738772 3740141 Acco07g0335 07 3738772 3740141 ECH