LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco07g0333	ATGCCCTGCAAATTCTTCCTACTTGGCTGTTTCAGGGCCAAGAATAATAAAAAGCCATCCTGTGATCCAACTCCAGTCTCCAGAAAGGCACCTTCCAGGAGACTGTCCCTCTCTGATTTGAGCGATGCTTCTTCAGTCTCTATTGTGAGTGATTTATCAAACTCTGTTTTGGGATCAAATCTTCATGATTTCACCTACAAGGAGCTTCAAGAGATCACTAACAACTTCAGCAGTAGCAGTGTTATCGGAGAAGGTGGGTTCGGCAAGGTGTATAAAGGCTTCATTGATGACAAGCTTAGGCGTGGATTAAAACCTCAAGTTGTGGCAGTTAAGGTTTTAGACTTAGATGGGAAACAAGGCCATAGAGAGTGGTTGGCAGAAGTTATATTTCTGGGGCAGTTGAAGCATCCAAATCTGGTGAACCTAATTGGGTATTGCTGTAAAGATGAGAACAGGCTACTGGTATATGAATACATGGAAAGGGGCAATTTAGAGGACAAGCTTTTTAAAGGCCATTTAGCAGCCTTGCCATGGCTAACAAGAATCAAAATAGCAATTGGGGCAGCAAAAGGTCTTGCCTTTCTTCACGAAGAAGAGAAACCAGTCATATACAGAGATGTTAAAGCCTCAAACATACTGTTAGATGCCGATTACAATGCTAAACTCTCTGATTTTGGGCTAGCCATAGACGGTCCAGACGAACATCAGAGCCACATCACAACTCGAGTTATGGGTACACATGGCTATGCAGCTCCTGATTACATTAAGACAGGACATTTAACAACAATGAGCGATGTATATAGCTATGGGGTGGTTCTCTTAGAGCTACTTACAGGAAAGAGATCTGTGGACAAGAATCGACGATCGAGAGAGCAGGATTTAGTAGAATGGGCAAGACCACTTCTGAAAAATACCCAGAAACTCGAAAGAATAATGGATCCCAGACTTGAGGGTCAATATTCAGTTGAAGGAGCCAAAAACGTGGCTGCTTTGGTTCACCAATGTCTGAGCCATCAAGCCAAGACTCGACCATCAATGCGAACCATGGTCAAGTCATTAGAGTCTATCATGAATCTCACCGACGACATTCTAGTGAGCCACTTGGTTCCTGGTGATGGTGAAGTGGACAGTTGGGTACAAAGTAGTAAAATTGAAAAAGAGGATGAAGTGAAGACGAAGGAGAAGAGTAGGCCCAGGAATCGGAGAAATCGAAGACGTAAAAAGTCTCGTGCCGTTTACACTGATACGACGTTGTATAAATCTCTTGGCACTAGTTTGTACAATCAAATTAGTGTCGTAAATTGA	1305	0.4291	MPCKFFLLGCFRAKNNKKPSCDPTPVSRKAPSRRLSLSDLSDASSVSIVSDLSNSVLGSNLHDFTYKELQEITNNFSSSSVIGEGGFGKVYKGFIDDKLRRGLKPQVVAVKVLDLDGKQGHREWLAEVIFLGQLKHPNLVNLIGYCCKDENRLLVYEYMERGNLEDKLFKGHLAALPWLTRIKIAIGAAKGLAFLHEEEKPVIYRDVKASNILLDADYNAKLSDFGLAIDGPDEHQSHITTRVMGTHGYAAPDYIKTGHLTTMSDVYSYGVVLLELLTGKRSVDKNRRSREQDLVEWARPLLKNTQKLERIMDPRLEGQYSVEGAKNVAALVHQCLSHQAKTRPSMRTMVKSLESIMNLTDDILVSHLVPGDGEVDSWVQSSKIEKEDEVKTKEKSRPRNRRNRRRKKSRAVYTDTTLYKSLGTSLYNQISVVN	434

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco07g0333	434	Gene3D	Transferase(Phosphotransferase) domain 1	159	366	-	-
	Acco07g0333	434	FunFam	protein STRUBBELIG-RECEPTOR FAMILY 8	159	363	-	-
	Acco07g0333	434	Pfam	Protein tyrosine and serine/threonine kinase	79	353	IPR001245	GO:0004672\|GO:0006468
	Acco07g0333	434	Gene3D	Phosphorylase Kinase; domain 1	37	158	-	-
	Acco07g0333	434	ProSitePatterns	Protein kinases ATP-binding region signature.	82	111	IPR017441	GO:0005524
	Acco07g0333	434	FunFam	Serine/threonine-protein kinase BIK1	43	158	-	-
	Acco07g0333	434	PANTHER	OS01G0588500 PROTEIN-RELATED	43	356	-	-
	Acco07g0333	434	SUPERFAMILY	Protein kinase-like (PK-like)	53	354	IPR011009	-
	Acco07g0333	434	CDD	STKc_IRAK	82	356	-	-
	Acco07g0333	434	SMART	serkin_6	76	357	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco07g0333	434	ProSiteProfiles	Protein kinase domain profile.	76	357	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco07g0333	434	MobiDBLite	consensus disorder prediction	389	412	-	-
	Acco07g0333	434	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	202	214	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco07g0333	Acco-ChrAcco07	3697826	3699935	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco07g0333	64	397	Glycoside Hydrolase	AT3G07070	47.337	3.86e-99	301

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VIIa-2	Acco07g0333		PK_Tyr_Ser-Thr	7.2e-48	CL0016