Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0311 ATGGCCGTAGCTCCGGCAATCCTCCGGCCAACTCTCCTCTTTCTCTGCGCCTTCTTCGTGGTTTTCCGATTGGCGAATTCAATGTCAGAAGCTGAAGCTTTGATTAATTTTAAAGCCTCATTATCCGATAATCAAGCTTTGAAAGATTGGGTGGTTAACTCTGTTCCTTGCAAAGAAGGCGAAGAATGGTACGGTGTTATCTGCAACGGTGGATTAATCTCTGGCATTCGATTAGAAGGAATAGGGTTATCAGGGAAGATTGATGTAAATCCATTGCTGGAACTCAAGCGGCTTCGAACTTTCAGCATTATGAGCAATTCATTTTCAGGTACAATTCCGAAAATCAATAAAATAGGTTTCTTGAGAGCCCTGTACTTGTCGGGAAATCAATTTTCCGGCGAGATTCCGTCAGGTTTCTTCCAGGAAATGAGGTCTCTGAAGAAGCTATTTCTTAACGACAACAACTTTACGGGTCAGATTCCGTCGCAGATTCCTCAACTCCTTGAGCTACGCCTTGAGAATAATCAGTTTAGCGGTAACCTCCCAAATCTGAGCAAAACATTGTTGATGGAATTCAATGTGTCCAACAACAAATTGGAAGGCGAAATCCCGACGAGCTTATCAAAATTTAGTGAGAGCTCATTTTCCGGGAATCCGGGACTCTGTGGTGAGAAATTAAACAAACTATGTCAAAATTCAGTTGAACCGCCAAAACCCATGGAAAATACGGAACAAGAACAAAATAAAGACGGCGCCGCCGCGTCTGATCCAAGTTCTAGCAGCAAGAGTAGTAACTCAGTGAAGATTGTGGCCATTGTTGTTGCATCAATTGTAGTGCTTCTCACAATTCTCGTTCTACTCTATATTCGGTCAAGGCAAAAGAAGAAGGATAATGGAATACTGGGTTCGGTCCGATCAGAGAACAACAACAACGAAGAATCATCAGCATCAGTGCAGGTTCACGTTGCTGCACCAGAGAAGAAAGAAGAGACAATCATGTCCAGAAAATCAAGCCGTAATGGTTCTGGCAGGAAGGGAAAAGGCGGTGGTGGCGGTGTCGGAGAGCTTGTGATGATGAATGGTGAAAAGGGTGTGTTTGGGATGCTTGATTTAATGAAGGCAGCAGCAGAAGTTTTGAGCAATGGAGGGTTTGGATCATCCTATAAAGCAGTGATGGCTGATGGGGTTTCAGTGGTGGTAAAGAGGATGAGGGAGATGAATGTGTTGTCGAAAAATGGGTTTGATGCAGAGATGAGGAATATTGGCAGTTTGAGACATAGAAATATCTTAACCCCTTTGGCTTATCATTATAGGAAGGATGAGAAGTTGGTGGTGTCTGAGTATGTTCCTAAAGGGAGTCTGCAATTTTTGCTGCATGGTGATCATGGACCATCCCATACTGAATTGGACTGGTCTACTGCTTTGAAAATTGTACGAGGGATTGTTGAAGGGATGGTTTATCTTCATAGACAGCTTGCTTCATCCATTTTACCTCATGGAAATCTCAAGTCTAGCAATATTCTACTTGGTCCTAATTATGAGCCAATGCTAGTTGATTTTGGGTTATGCTCTTTGATCAACCCTGCTAATCTAAGTCAAGCCTTATTTGCTTACAAGACTCCTGAAGCCTTACAGAAAGGTCAAGTTTCTCCCAAATCTGATGTTTACTGTTTGGGAGTTGTCATTCTTGAGATACCCTCTCGGAAATTCCCTTCCCAATATCTAAACAATGGCAGTGGTGGAATTGACGTAGTTCAGTGGGCCAACTCAGCACTATCTGAAGGAAGGATATTAGAGATGCTCGATCCTCAACTTGCAAGCTCTAAAAATTCCATTGGTCAGATGGAGAGACTCGTCTATCTCGGTGTTGCTTGCACTGCAAGCGACCCTGAGCAGCGACCAGACATGTCAGAAGTGTTGAGAAGGATTGATGAAATACAAAATAAAGATTCCCAGGAATCAGTTTCAAAGGATCAAGATGAGTGTTCCCAGAGAAGTTTGGGATCAAGCAGCGTTGGAAGCCAATCGGGACACCAGCACACTGATAGTGGTGATTTTGCCATTTCCTAA 2070 0.4324 MAVAPAILRPTLLFLCAFFVVFRLANSMSEAEALINFKASLSDNQALKDWVVNSVPCKEGEEWYGVICNGGLISGIRLEGIGLSGKIDVNPLLELKRLRTFSIMSNSFSGTIPKINKIGFLRALYLSGNQFSGEIPSGFFQEMRSLKKLFLNDNNFTGQIPSQIPQLLELRLENNQFSGNLPNLSKTLLMEFNVSNNKLEGEIPTSLSKFSESSFSGNPGLCGEKLNKLCQNSVEPPKPMENTEQEQNKDGAAASDPSSSSKSSNSVKIVAIVVASIVVLLTILVLLYIRSRQKKKDNGILGSVRSENNNNEESSASVQVHVAAPEKKEETIMSRKSSRNGSGRKGKGGGGGVGELVMMNGEKGVFGMLDLMKAAAEVLSNGGFGSSYKAVMADGVSVVVKRMREMNVLSKNGFDAEMRNIGSLRHRNILTPLAYHYRKDEKLVVSEYVPKGSLQFLLHGDHGPSHTELDWSTALKIVRGIVEGMVYLHRQLASSILPHGNLKSSNILLGPNYEPMLVDFGLCSLINPANLSQALFAYKTPEALQKGQVSPKSDVYCLGVVILEIPSRKFPSQYLNNGSGGIDVVQWANSALSEGRILEMLDPQLASSKNSIGQMERLVYLGVACTASDPEQRPDMSEVLRRIDEIQNKDSQESVSKDQDECSQRSLGSSSVGSQSGHQHTDSGDFAIS 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0311 689 ProSiteProfiles Protein kinase domain profile. 373 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0311 689 Gene3D Transferase(Phosphotransferase) domain 1 449 671 - -
Acco07g0311 689 MobiDBLite consensus disorder prediction 231 263 - -
Acco07g0311 689 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 90 180 - -
Acco07g0311 689 SUPERFAMILY L domain-like 28 224 - -
Acco07g0311 689 MobiDBLite consensus disorder prediction 646 689 - -
Acco07g0311 689 MobiDBLite consensus disorder prediction 646 660 - -
Acco07g0311 689 MobiDBLite consensus disorder prediction 236 263 - -
Acco07g0311 689 Gene3D Ribonuclease Inhibitor 186 230 IPR032675 -
Acco07g0311 689 MobiDBLite consensus disorder prediction 661 683 - -
Acco07g0311 689 Gene3D Ribonuclease Inhibitor 28 185 IPR032675 -
Acco07g0311 689 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 652 IPR046959 -
Acco07g0311 689 MobiDBLite consensus disorder prediction 300 353 - -
Acco07g0311 689 Gene3D Phosphorylase Kinase; domain 1 372 448 - -
Acco07g0311 689 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Acco07g0311 689 Pfam Protein kinase domain 377 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0311 689 SUPERFAMILY Protein kinase-like (PK-like) 377 642 IPR011009 -
Acco07g0311 689 MobiDBLite consensus disorder prediction 302 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0311 Acco-ChrAcco07 3411185 3413670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0311 12 646 Receptor kinase-like Gene Family AT3G42880 43.769 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco07g0311 Pkinase 5.9e-29 CL0016