Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0296 ATGGCCGGTTTTTCCTTTGAAACAGACTACAATTCCTCAAGTCAACACTATCCCACGCGACGTCACCCGACGACTCCAGTGAGTTCTCGCAACACGTCTCGGTCTTTCACGGCGGCGTCGAGCTCTCCGGGTAGCTGCAATTATGGACTTGGCCGCTGGAACAGGGCTCCGTCGATTCCCATTACTTCCGACGACGACCGTTCATGGCAGACAGAAGTTTCATGGCAATTTGAACCCACCGGGGCGCGCGAGTACGGTAGCAGAAACTTGGGCTCTATTTTCATTCCTTGGGCCCCAAGCCCAGCCCAATCAGATCGGAGCCGGGTTTTCCGTCGGTCCGCGAAAGATTATTACCTTTCAAGAACGAGCGGGTTCTCCAGAGGAAACCGTTTTGCCGCGAACTCAAATTCTGAAGCTTCAGGCTATGTCGTTCCATCTGGAAGAGTCGAGCTTCAGAGCTTCGTCGCCGGCGAGAATGGCGATCAGAATAGCAAGTCTTATAGTGGATTTTCGAGATTGGATGTTATCAAAGAAGGAATTATTGGTCCTAGAAAGGGGAAGAGTAGTCCCTTAGCGGAAGAAGATGAACTTAGTTTTACGTCTTTTAGTGTTGGTCGAGTTCCACAACTGTCATATACGAAGCATGATAGCTATAGTGATCATGGGAAGATAGTACCGGCGCATTTAAGCCACGCCGATGGCGGGTATCGTGAAGAAGATGATGAGGAGGATATGGATTATGATGATGATGAATTGGACCCTCCAAAAGCTGTTGGGTTGTTCAGCTTGTTTCGGTACTCAACAAAGTGGGATTTAGTACTTGTGTTTTTGGGTTGCTTGGGGGCTCTCATAAATGGAGGTTCACTTCCTTGGTATTCTTTTCTCTTTGGACAAGTTGTCAATAAGATTTCTGAACAATCAAATGATGGTGCCAACAAAGCCCATATAATGAAGGATATAGAGAGGATATGCTTATATATGACTATGTTAGCTGCAGTGGTGATGGTTGGAGCATATATGGAGATCACATGTTGGAGGTTGATAGGAGAGCGATCTGCTCAAAGAATAAGAAGAGAATATCTGAGAGCTGTTCTTCGTCAGGACATTAGCTTTTATGACACAGAGATCAGCACTGCTGATATTATGCATGGGATTGCAAGTGATGTTGCACAAATTCAAGAAGTTATGGGAGATAAGATGGCTCACTTCATTCATCATTTATGCACATTCATAACTGGGTATGCAGTTGGGTTTGCAAGGTCATGGAAAGTCTCTCTGGTGGTACTCTCAGTCACCCCAGTGACCATGTTGTGTGGTTTAGCTTACAAGGGTATTTATGGTGGTTTATCAGCAAAAGAGGAGGCTTCTTATAGAATGGCTGGTAGCATTGCAGAGCAGGCCATCAGTTCAATTAGGACAGTTTTTTCTTTTGTTGCTGAAAGCCAGATGGCTACGAAGTATTATGACCTGCTGAAAAATTCAGTCCCACTTGGGGTCAAAATTGGTTTTGCTAAGGGTGCAGGAATGGGAGTCATTTATTTAGTAACATACGCAACATGGGCCTTGGCTTTCTGGTATGGCTCTATCTTAATTGCCAAGGGAGAGATTGATGGAGGTCGGGCCATTGCCTGTTTCTTTGGAGTCATGGTAGGGGGAAGAGGCTTGGCATTGGCACTTTCATATTTTGCACAGTTTGCACAAGGCATTGTTGCAGCAAGCCGAGTATTTGAAATCATAGAGAGAGTCCCTGAGATTGATCCCTACAGCCCTGAGGGAAGGAGGCTCTCTAATGTTCGTGGAAGGATTGAATTCAAAAGTGTTATCTTTGCATACCCAGCTCGTCCTGATGCTCTAATCCTTAATTCTCTTAAACTAGTTATTCCTTCTTCAAGAACTACAGCTCTTGTTGGTGCCAGTGGAGGGGGCAAGTCTACCATTTTTGCGCTAGTAGAGAGGTTTTATGACCCTATTGAAGGGATAGTAACCTTAGATGGTCATGATTTGAGGACATTGCAAGTCAAGTGGCTAAGAGATCAAATAGGAATGGTAGGTCAAGAACCAATTCTTTTTGCGACAACCATTCTGGAAAATGTGATGATAGGGAAGGACAATGCCACCAAGAAAGAGGCAATTGCAGCTTGCATTGCAGCTGATGCCCACAACTTCATCTCTGGCCTACCCCACGGTTATGACACTAAGGTTGGAGCTAAGGGTACCCAACTCTCTGGAGGTCAGAAGCAGAGAATTGCATTGGCTCGAGCCATTATCAGAGATCCTAAAATCCTTATATTGGATGAACCTACCAGTGCTCTTGATGCCAAGTCAGAGTCTGTGGTACAACAGGCTATTGACAAGATTTCTGCTGGACGAACAACCATTGTCATTGCTCACAGGATAGCAACAGTAAAGAATGCCCACACTATTGTGGTTCTTGAAAATGGTTCTGTGACTGAGATTGGTGATCATCGACAGCTTATGGGAAAGGCAGGTGCCTACTATAACCTTGTCATGCTTGCTACGGAAGCCACATCAAAACCAGTGTCTGACAGCATACAAAAGGTCAATGGTTTTTCTGTCTATGAGAACTCAGTTCCTGATATCTCAAGGTCCAAGTTCTTAAAATCCATTCAAGACGAAAAACAAGCTGATACGGAAGATGAGCAACAAAAGAAGCCCGGAAATTTTCAACTTTCTGAGGTATGGAAACTGCAAAAACCAGAGTTTGTGACTCTGTTTTCGGGATTTGTTCTGGGTATGCTTGCTGGTGCTTTTCTCTCCATTTTCCCGTTGCTTCTAGGCATAGCCCTTGAAGTATACTTTAAAAACGACACAAAAACAATGAAGAAAGATATCAGCCATATATGTTTAATTCTTATTGGGCTGGGGTTTGGTTGCATAATCTCTCTGACAGGACAGCAAGGTTTGTGTGGTTGGGCTGGAACTAAGCTCACAATGAGGATTAGAGACCTCCTTTTTCAATCCATACTAAAACAAGAACCAGGGTGGTTTGATTTTGAGGAAAATTCCACTGGAGTGCTAGTGTCAAGGCTATCTATTGACAGTATTAGTTTTCGATCAGTGCTTGGTGATCGAGTTTCTGTCCTTCTAATGGGGCTGAGCTCAGCTGCTGTTGGGCTTGGGGTGTGCTTCAAATTTGATTATAAAATAACTTTGGTGGCTGCTGCACTAACTCCTTTCACTCTTGGTGCAAACTATCTAAACTTGATTATAAACCTTGGACCACGAGTCAACAATGATTCCTTTGCCAGAGCTAGTAACATCGCTTCTGGTGCAGTTTCAAACATAAGGACAACCCTTGCCTTTTCTGCCCAAGAAGAGATAGTCAAATCCTTTGATCGGGCATTATCAGAACCTAGGAGAAAATCAGTAAAAAGATCACAGATTCTCGGGCTAGTGCTTGGGTTCTTCCAAGGGGCCATGTATGGAGCATACACCTTAGTTCTTTGGTTTGGTGCCCTCCGTGTAAAACAAGAGAAAGCGGATTTCGGGGCTGTATACAAGATTTTTCTCATCCTTGTTTTGAGCTCATTTTCTGTGGGACAACTAGCTGGTTTAGCACCAGATACTTCAATGGCAGCTACTGCAATTCCAGCTGTTCTAGATATCATACACCGTAGACCATTGATAGGGAATGATGGGAATAAAGGTAAGAAACTAGAAAGATCAAAGCTGTTGAAGCTAGAATTCAAAATGGTGACATTTGCGTATCCATCTAGGCCTGATGTGGTAGTATTGAGGAATTTCAATTTGAAAATCAAAGGTGGAAGCACAGTTGCCTTAGTAGGGGCAAGTGGATCAGGAAAATCAACAGTCATATGGTTGATACAGAGGTTCTATGATCCAAACCAGGGGCAAGTGATGATGGGTGGGTTAGATTTGAGAGCCATTGATGTGAATTGGTTGAGGAGGCATACAGCTTTGGTGGGTCAAGAACCTGCACTTTTTGCTGGGAGTATAAGGGAGAATATTGCCTTTGGAGACCCAGAAGCTTCCTGGGCTGAAATTGAAGTAGCAGCAAAGGAAGCTTACATTCACAAATTCATTAGTAGCCTTCCTCAAGGTTATGAAACTCAGGTTGGTGAGAGTGGGGTCCAGCTATCAGGTGGCCAAAAACAGAGGTTAGCAATTGCAAGGGCCATATTGAAGAAATCAAGGGTACTACTACTTGATGAAGCAAGTAGTGCCTTGGACTTGGAATCAGAAAAGCATGTCCAAGAAGCACTGAAGAATGTTACAAGAGATACAACTACTGTAATAGTAGCTCACCGTCTTTCTACGATCAGAGGGGCTGGTGGCATCGCGGTGGTGAGAGAAGGAACGGTGGCTGAATATGGAAGCCATGATACTCTCCTTACTTCCCATCCCAATGGTTTGTATGCTAGCCTGATTCGTTCTGAAACTGAAGTTAATGCCTTTAAATAA 4443 0.4411 MAGFSFETDYNSSSQHYPTRRHPTTPVSSRNTSRSFTAASSSPGSCNYGLGRWNRAPSIPITSDDDRSWQTEVSWQFEPTGAREYGSRNLGSIFIPWAPSPAQSDRSRVFRRSAKDYYLSRTSGFSRGNRFAANSNSEASGYVVPSGRVELQSFVAGENGDQNSKSYSGFSRLDVIKEGIIGPRKGKSSPLAEEDELSFTSFSVGRVPQLSYTKHDSYSDHGKIVPAHLSHADGGYREEDDEEDMDYDDDELDPPKAVGLFSLFRYSTKWDLVLVFLGCLGALINGGSLPWYSFLFGQVVNKISEQSNDGANKAHIMKDIERICLYMTMLAAVVMVGAYMEITCWRLIGERSAQRIRREYLRAVLRQDISFYDTEISTADIMHGIASDVAQIQEVMGDKMAHFIHHLCTFITGYAVGFARSWKVSLVVLSVTPVTMLCGLAYKGIYGGLSAKEEASYRMAGSIAEQAISSIRTVFSFVAESQMATKYYDLLKNSVPLGVKIGFAKGAGMGVIYLVTYATWALAFWYGSILIAKGEIDGGRAIACFFGVMVGGRGLALALSYFAQFAQGIVAASRVFEIIERVPEIDPYSPEGRRLSNVRGRIEFKSVIFAYPARPDALILNSLKLVIPSSRTTALVGASGGGKSTIFALVERFYDPIEGIVTLDGHDLRTLQVKWLRDQIGMVGQEPILFATTILENVMIGKDNATKKEAIAACIAADAHNFISGLPHGYDTKVGAKGTQLSGGQKQRIALARAIIRDPKILILDEPTSALDAKSESVVQQAIDKISAGRTTIVIAHRIATVKNAHTIVVLENGSVTEIGDHRQLMGKAGAYYNLVMLATEATSKPVSDSIQKVNGFSVYENSVPDISRSKFLKSIQDEKQADTEDEQQKKPGNFQLSEVWKLQKPEFVTLFSGFVLGMLAGAFLSIFPLLLGIALEVYFKNDTKTMKKDISHICLILIGLGFGCIISLTGQQGLCGWAGTKLTMRIRDLLFQSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRVSVLLMGLSSAAVGLGVCFKFDYKITLVAAALTPFTLGANYLNLIINLGPRVNNDSFARASNIASGAVSNIRTTLAFSAQEEIVKSFDRALSEPRRKSVKRSQILGLVLGFFQGAMYGAYTLVLWFGALRVKQEKADFGAVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLDIIHRRPLIGNDGNKGKKLERSKLLKLEFKMVTFAYPSRPDVVVLRNFNLKIKGGSTVALVGASGSGKSTVIWLIQRFYDPNQGQVMMGGLDLRAIDVNWLRRHTALVGQEPALFAGSIRENIAFGDPEASWAEIEVAAKEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRLAIARAILKKSRVLLLDEASSALDLESEKHVQEALKNVTRDTTTVIVAHRLSTIRGAGGIAVVREGTVAEYGSHDTLLTSHPNGLYASLIRSETEVNAFK 1480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0296 1480 CDD ABC_MTABC3_MDL1_MDL2 1235 1471 - -
Acco07g0296 1480 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 276 567 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco07g0296 1480 FunFam ATP-binding cassette transporter, subfamily B, member 2, group MDR/PGP protein PpABCB2 1085 1225 - -
Acco07g0296 1480 FunFam Multidrug resistance protein 1, 2, 3 600 852 - -
Acco07g0296 1480 Gene3D ABC transporter type 1, transmembrane domain 262 1202 IPR036640 GO:0005524|GO:0016020
Acco07g0296 1480 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 602 838 IPR003439 GO:0005524
Acco07g0296 1480 ProSitePatterns ABC transporters family signature. 1373 1387 IPR017871 GO:0005524|GO:0016887
Acco07g0296 1480 Pfam ABC transporter transmembrane region 912 1182 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco07g0296 1480 Pfam ABC transporter transmembrane region 275 551 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco07g0296 1480 CDD ABC_MTABC3_MDL1_MDL2 602 839 - -
Acco07g0296 1480 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1234 1470 IPR003439 GO:0005524
Acco07g0296 1480 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 914 1198 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco07g0296 1480 SUPERFAMILY ABC transporter transmembrane region 262 587 IPR036640 GO:0005524|GO:0016020
Acco07g0296 1480 PANTHER ABC TRANSPORTER B FAMILY 241 838 IPR039421 -
Acco07g0296 1480 ProSitePatterns ABC transporters family signature. 741 755 IPR017871 GO:0005524|GO:0016887
Acco07g0296 1480 SMART AAA_5 629 830 IPR003593 GO:0016887
Acco07g0296 1480 SMART AAA_5 1261 1447 IPR003593 GO:0016887
Acco07g0296 1480 Gene3D - 592 840 IPR027417 -
Acco07g0296 1480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1232 1471 IPR027417 -
Acco07g0296 1480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 593 837 IPR027417 -
Acco07g0296 1480 MobiDBLite consensus disorder prediction 1 46 - -
Acco07g0296 1480 SUPERFAMILY ABC transporter transmembrane region 900 1214 IPR036640 GO:0005524|GO:0016020
Acco07g0296 1480 FunFam ABC transporter B family member 1 1223 1474 - -
Acco07g0296 1480 Gene3D - 1229 1478 IPR027417 -
Acco07g0296 1480 CDD ABC_6TM_Pgp_ABCB1_D2_like 901 1216 - -
Acco07g0296 1480 Pfam ABC transporter 1252 1400 IPR003439 GO:0005524
Acco07g0296 1480 CDD ABC_6TM_Pgp_ABCB1_D1_like 276 575 - -
Acco07g0296 1480 Pfam ABC transporter 620 769 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0296 Acco-ChrAcco07 3261389 3270416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0296 942 1473 Calmodulin-binding Proteins AT2G36910 37.828 1.36e-102 356