Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0268 ATGATGTTTCATCCTGGAGGAACTCCCAAACAAACTTGTAGTCTACTTGCTGTCACATGTGGCAAAAACGTTGAGCTTGAGTTCGACAATAAACTCACTCAGAATCAGCTCAAATATCCTTTTCCCGAGTTAACTTCTTCAGGGCGTTTGGAGGTCCAAACTCTAAACAATCCAGAAAAAGAACAGTTCCGGAAATTACTCGAGTCTTATCAACCAAATTTTGTATATTTACGAGGAGAACAGCTTGCAGATGGCGAAGTTGGTTCTTTGATCTGGCAAGGCGAAGAATTGGCCACCTCTGAAGCTATATCAGAGCTTTTTGGTCCCACATTGCCAACCGCTGTATACTTGGAAATCCCAAATGGGGAAAATTTCGCAGAAACTCTTCATCTTAAGGGTGTTTCATATGTGATTTATTGGAAAAGTACTTTTTCTTGTTATGCTGCTTGCCATTTTTTTCAAGCATTTCTTTCAGCGGTGCAGAGCTCTTCTACACATACATGGGACGCCTTTCACCTTGCCCGTGCTTCTTTTGAGTTTTATTGTGTTCAAAACAATCGAGTCCTTCCTTGTGAGAAACATGATTCTAGTGACAATATAGGGCCACACCTTCTTGGAGACCGTCTCCAAATCAATATTGATCCTCCTGAGGTTTGTGAAGATGATGAGGAAAGTTCCTCAGGCACTCTTCCTGCTATAAAGATACATGATGATGAAGTGAACTTGAGATTTCTTATCTGTGGTTCGCCTTCAATTGTGGATGAGTCACTATTGACATCATTGGTGGATGGACTCAAAGCACTCTTAACCATTGAAATACGAGGGAGCAAACTCCATGGCAAGTTTAGTGCTCCCCCACCACCTCTTCAAGCAGCCACTTTTTCTCGAGGAGTTGTGACCATGCGATGTGATATATCAACCTGTAGTTCAGCCCATATCTCTCTTCTGGTGTCTGGCAGTGCTCAAACTTGCTTCAATGATCAGTTGTTGGAGAATCATATAAAAAATGAGATAATTGAGAATAGTCAACTAGTTTGTGCCCAAATTGATGAGGGAAACAAACAGCAAGTCTCTGAACCTCGTAGATCTGCCTCAATTGCTTGTGGAGCAGCTGTATTTGAAGTTTGCATGAAGCTTCCTCTATGGGCCTCGCAGGTATTGAGACAGCTAGCTCCTGAAATTACTTATCGAAGTTTAGTTGCACTTGGGATTGCTAGCATTCAGGGGTTGCCTGTTGCTTCATTCGAGGAAGATGATGCTGATCGCCTGCTTTTCTTTTATCGAAGTCAAGAGAAAGATAGTGATGCAGACAAAATCATTTTCAGCAGCCCCCCTGGTTGGTTGAAACCACCCCCTCCTACTAGAAAAAGGGGTGAGGCAAGCCTTGGCCTTCAACATGGTGTTTTAACTGGGCAAGGTGTTGTTCAAAAAGCAGATGAAGAGGAAAAGGATACAAAACCGGTGAATGGAATTGGCACATCCTTAACTCCAGCTAGGCAGAGATTAAAAGTGTCTGCAATGAGGCCCATCCCTCATGTTCATCGCCATAGGATGACACTTTTTTCTGGACCTTCTGAGACAGATGCTTGTGATGGTGCCCAAGTTGAAGCTAGTTTACCACTTGTTGTCCCTGCAAAGCGCAGTACTACTGGTTTAAGTTCTGCAACACAGAGAAGGTCATTTTCAGGCTCAGCTCAGTCTAAGCAGATTATTTCCTTGAACCCACTGCCGTTGAAAAAACATGGTTGTAGTAGAGGTCCTATTCAAACTTGCTCTGAGGAGGAATTTTTGAAAGATGTCATGGAGTTTCTAATGCTTCGAGGACATAGTCGATTAATTCCTCAAGGTGGGCTTTCTGAGTTTCCTGATGCCATACTCAATGGGAAAAGACTCGATCTCTACAACTTGTATAGAGAGGTGGTTACCAGGGGAGGATTCCATGTTGGTAATGGCATCAATTGGAAAGGACAAATCTTCTCAAAGATGCGCAATTACACAGCCACCAATAGAATGACTGGCGTTGGGAATACACTCAAAAGGCATTATGAAACATACCTTCTTGAATATGAATTAGCACACGATGATGTGGATGGAGAGTGTTGCTTATTATGCCACAGTAGTGCACCCGGGGATTGGGTGAATTGTGGCATATGTGGCGAGTGGGCCCACTTTGGATGTGACAGACGGCAAGGTCTTGGCGCATTTAAGGATTATGCAAAAACAGATGGACTAGAATATATTTGTCCTCATTGTAGTGTAACAAATTTCAAGAAGAAACCCTCAGGTGTTGCTGCTAATGGGTTTTCTCAGGGGTCAATGGCATCAAAACCCCTTTGA 2337 0.4309 MMFHPGGTPKQTCSLLAVTCGKNVELEFDNKLTQNQLKYPFPELTSSGRLEVQTLNNPEKEQFRKLLESYQPNFVYLRGEQLADGEVGSLIWQGEELATSEAISELFGPTLPTAVYLEIPNGENFAETLHLKGVSYVIYWKSTFSCYAACHFFQAFLSAVQSSSTHTWDAFHLARASFEFYCVQNNRVLPCEKHDSSDNIGPHLLGDRLQINIDPPEVCEDDEESSSGTLPAIKIHDDEVNLRFLICGSPSIVDESLLTSLVDGLKALLTIEIRGSKLHGKFSAPPPPLQAATFSRGVVTMRCDISTCSSAHISLLVSGSAQTCFNDQLLENHIKNEIIENSQLVCAQIDEGNKQQVSEPRRSASIACGAAVFEVCMKLPLWASQVLRQLAPEITYRSLVALGIASIQGLPVASFEEDDADRLLFFYRSQEKDSDADKIIFSSPPGWLKPPPPTRKRGEASLGLQHGVLTGQGVVQKADEEEKDTKPVNGIGTSLTPARQRLKVSAMRPIPHVHRHRMTLFSGPSETDACDGAQVEASLPLVVPAKRSTTGLSSATQRRSFSGSAQSKQIISLNPLPLKKHGCSRGPIQTCSEEEFLKDVMEFLMLRGHSRLIPQGGLSEFPDAILNGKRLDLYNLYREVVTRGGFHVGNGINWKGQIFSKMRNYTATNRMTGVGNTLKRHYETYLLEYELAHDDVDGECCLLCHSSAPGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGLEYICPHCSVTNFKKKPSGVAANGFSQGSMASKPL 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0268 778 Gene3D - 585 691 IPR036431 GO:0003677
Acco07g0268 778 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 8 773 IPR042293 -
Acco07g0268 778 SMART ARID_2 587 690 - -
Acco07g0268 778 SUPERFAMILY ARID-like 590 706 IPR036431 GO:0003677
Acco07g0268 778 SMART bright_3 591 695 IPR001606 GO:0003677
Acco07g0268 778 ProSiteProfiles ARID domain profile. 590 694 IPR001606 GO:0003677
Acco07g0268 778 Pfam ARID/BRIGHT DNA binding domain 593 690 IPR001606 GO:0003677
Acco07g0268 778 CDD PHD_ARID4_like 700 751 - -
Acco07g0268 778 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 692 759 IPR013083 -
Acco07g0268 778 SUPERFAMILY FYVE/PHD zinc finger 690 757 IPR011011 -
Acco07g0268 778 CDD ARID 592 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0268 Acco-ChrAcco07 2880184 2887784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0268 2 768 ARID Transcription Factor Family AT3G43240 59.067 0.0 915
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Acco07g0268 ARID 1.2e-14 CL0123