Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0260 ATGAGTAAGCTCAGGCGAGTCTTCGCCGGGATCTCAGATCCCAGCAACAACAAGAGAAACAAAAAGCTCTTTCTCGCTCTGTTCTCCACACTCCTCCTACTCGCCGCCGTTGTTGGCATCGTCGCCGGAGTCAACTCCCGCCAAAAATCCTCCGGTGACGATAATTTGAATTTCTCCTCCCATCCTTCCCACGCCATCGTTAAATCCGCATGCAGCACCACACTTTACCCTGAACTTTGCTACTCCGCCGTCTCCTCCGAGCCTGGATTCACCGAGAAAGTCTCTTCCCAACGCGATGTCATCGAACTGTCCTTAAACATAACGATCAGAGCCGTTGAGCACAATTTCTTCAACATCGAGAAGCTAAACGTTAAAAGAAAGGGTAGCCTCACGAAGAGAGAGAAAACCGCTCTTCATGATTGTTTGGAGACAATCGACGAAACGCTCGACGAGCTTCACACCGCTTACCAAGATCTGAAAGTCTATCCGAACAAGAAAACTCTGTACCAGCACGCCGACGATCTAAAGACTCTGATTAGTGCTGCCATTACCAACCAGGTCACTTGCCTTGACGGATTCTCTCACGACGGTGCCGATAAGAAAGTCAGAGGAGCTCTGGAGAAAGGGCAGGTTCACGTGGAGAAAATGTGCAGCAATGCTCTGGCGATGATTAAGAACATGACGGACACAGATGTGGCGAACTACGAGATGAAGATGGGGATTACAAAGAACAGGAGGCTGATGGCGGAAGACGGTGTTCAGTGGCCGGAGTGGATGTCGGCGGCAGACAGGCATTTGTTGCAAGCGCCGCAGGTGAAGGCTGACGTGGTGGTAGCCGCGGACGGGAGTGGAAATTTTAAGACGGTGTCGGAGGCAGTGGCGGCGGCTCCGGAGAAGAGTTCGAAGAGATACGTGATTAAGATCAAAGCAGGAGTTTACAGAGAAAATGTGGAAGTTTCAAAGAAGAAGACGAATATAATGTTCTTGGGAGATGGAAGAAAGAATACTATCATCACCGGAAGCAGGAATGTTGTTGACGGAAGCACCACTTTCCATTCTGCCACAGTCGCTGTAGTGGGAGAAAGATTCTTAGCTCGCGATATAACCTTTCAAAACACGGCCGGCCATGCCAAGCACCAAGCCGTCGCCCTCCGGGTAGGTTCCGACTTCGGCGCCTTCTACCAATGCGACTTCCTCGCCTACCAGGACACCCTCTACGTCCACAACAACCGCCAGTTCTTCATCAACTGCCTCATTGCCGGCACCGTTGACTTCATCTTCGGCAACTCCGCCGCCTTGTTCCAAGACTGCGACATCCACGCCCGCCTCCCCGGAGCTGGCCAGAAGAACATGATCACTGCACAGGGTCGGGTTGACCCAAACCAGAACACCGGCATCGTTATCCAGAAGTGCCGGATCGGAGCCACGTCAGAACTGGAGGCAAAAAAGAAGGACTTCAAGACCTACCTGGGCCGGCCATGGAAGGAGTATTCGAGGACAGTGATAATGCAGTCGACCATATCGGACGTGATCGATCCAGTGGGATGGCACGAGTGGAATGGGAATTTCGCTTTGAACACTCTGTTCTATGGAGAGTATCAGAACAGTGGCGCCGGTGCCGGAACGGCGAACAGAGTGAAGTGGAAGGGGTACAAGGTCATAACGAGTGCTTCGGAGGCTCAACAGTTCACTGCTGTCAGCTTTATTGGTGGCTCTAACTGGTTGGGCTCCACTGGTTTTCCCTTCTCCCTGGGTCTTTAG 1761 0.5213 MSKLRRVFAGISDPSNNKRNKKLFLALFSTLLLLAAVVGIVAGVNSRQKSSGDDNLNFSSHPSHAIVKSACSTTLYPELCYSAVSSEPGFTEKVSSQRDVIELSLNITIRAVEHNFFNIEKLNVKRKGSLTKREKTALHDCLETIDETLDELHTAYQDLKVYPNKKTLYQHADDLKTLISAAITNQVTCLDGFSHDGADKKVRGALEKGQVHVEKMCSNALAMIKNMTDTDVANYEMKMGITKNRRLMAEDGVQWPEWMSAADRHLLQAPQVKADVVVAADGSGNFKTVSEAVAAAPEKSSKRYVIKIKAGVYRENVEVSKKKTNIMFLGDGRKNTIITGSRNVVDGSTTFHSATVAVVGERFLARDITFQNTAGHAKHQAVALRVGSDFGAFYQCDFLAYQDTLYVHNNRQFFINCLIAGTVDFIFGNSAALFQDCDIHARLPGAGQKNMITAQGRVDPNQNTGIVIQKCRIGATSELEAKKKDFKTYLGRPWKEYSRTVIMQSTISDVIDPVGWHEWNGNFALNTLFYGEYQNSGAGAGTANRVKWKGYKVITSASEAQQFTAVSFIGGSNWLGSTGFPFSLGL 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0260 586 CDD PMEI-like_3 69 228 - -
Acco07g0260 586 Gene3D Invertase/pectin methylesterase inhibitor family protein 63 228 IPR035513 -
Acco07g0260 586 FunFam Pectinesterase 63 228 - -
Acco07g0260 586 Gene3D - 269 586 IPR012334 -
Acco07g0260 586 NCBIfam pectinesterase inhibitor domain 60 227 IPR006501 GO:0004857
Acco07g0260 586 SMART PMEI_2 62 223 IPR006501 GO:0004857
Acco07g0260 586 Pfam Plant invertase/pectin methylesterase inhibitor 66 223 IPR006501 GO:0004857
Acco07g0260 586 PANTHER PECTINESTERASE 32 576 - -
Acco07g0260 586 ProSitePatterns Pectinesterase signature 2. 419 428 IPR033131 -
Acco07g0260 586 FunFam Pectinesterase 269 586 - -
Acco07g0260 586 Pfam Pectinesterase 275 571 IPR000070 GO:0030599|GO:0042545
Acco07g0260 586 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 66 228 IPR035513 -
Acco07g0260 586 SUPERFAMILY Pectin lyase-like 271 585 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0260 Acco-ChrAcco07 2801054 2807025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0260 16 586 Carbohydrate Esterase AT3G14310 70.289 0.0 815