Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0255 ATGGGTGTCACGACAGGAACAGATCCCAATTCCGGCGACTCTCCAGGATTGGAAATAACCGGAAAGATCATGATCGTAGCTATACTTTTCCTATTTTTCGTGATTGTTATCGTCTGTTTCCTCCATCTCTACGCCAAATGGTTCTGGTGGACCATTGAACGAAGCAACAGCACCACTGACCACCACCACAACGGCCGCCGCCGCCGCCGCCGTCGCTTTGTCTTCTCACCAGGACAAGATCCCGCTATCAACGGCGTCCAGCGACGTGGACTTGAACCACAAGTCCTTAGATCCTTACCTGTATCGGTATACCGACCAGAGGATTTCGAAGATGGTCTGGAATGTGCAGTTTGTCTCAGCGAGCTTGCTGATGGAGAAAAAGCAAGGATATTACCTAAATGCAATCATGGATTTCACGTAGAATGCATTGATATGTGGTTCCAATCACATTCTACTTGTCCAATTTGCAGGAACCTGGTAGATTCTGAGTTCTCTGAACCCAATAACACTCTAGGTGTTCGACAAAATGTCGCAGACAATTATAGTGAATCATCAGACTCAGAAAGTTCAGATGCAATGAGCGAGGCAGATTTAGAGTCTGCAAATTTCCCTACAAATGTGTTGATTTGGGGAAATGAAGCCCAAGTAAATTCTATTGGCGCAGGTCCTTCTGTTCAGGCACCGTCTTCATCATCATCGGTAGCAGCAGATTGTTGCAGCCGTAGTAACAATAACAATAGACGCAATGGAATGTTGGTGATTGACATACCAAGAGAGACGAATCCATCATCTTTAGCTTCTACTAGCAGGTATGCTGAAGATGATTTGAAGTCACCAATGACTTCTAGACTCCAATCATTCAGGAGGATGTTAAGCATGAGGTTCAGTCCTCGAAGTCCTAGTTCTGTAGATGTGGAACAAGCAGGGAGAGGACAGAGCTAG 942 0.4575 MGVTTGTDPNSGDSPGLEITGKIMIVAILFLFFVIVIVCFLHLYAKWFWWTIERSNSTTDHHHNGRRRRRRRFVFSPGQDPAINGVQRRGLEPQVLRSLPVSVYRPEDFEDGLECAVCLSELADGEKARILPKCNHGFHVECIDMWFQSHSTCPICRNLVDSEFSEPNNTLGVRQNVADNYSESSDSESSDAMSEADLESANFPTNVLIWGNEAQVNSIGAGPSVQAPSSSSSVAADCCSRSNNNNRRNGMLVIDIPRETNPSSLASTSRYAEDDLKSPMTSRLQSFRRMLSMRFSPRSPSSVDVEQAGRGQS 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0255 313 FunFam RING-H2 finger protein ATL3 83 162 - -
Acco07g0255 313 MobiDBLite consensus disorder prediction 169 197 - -
Acco07g0255 313 MobiDBLite consensus disorder prediction 291 313 - -
Acco07g0255 313 MobiDBLite consensus disorder prediction 221 279 - -
Acco07g0255 313 Pfam Ring finger domain 114 157 IPR001841 -
Acco07g0255 313 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 16 160 IPR044675 -
Acco07g0255 313 CDD RING-H2_EL5-like 114 157 - -
Acco07g0255 313 SUPERFAMILY RING/U-box 94 164 - -
Acco07g0255 313 MobiDBLite consensus disorder prediction 295 313 - -
Acco07g0255 313 MobiDBLite consensus disorder prediction 221 250 - -
Acco07g0255 313 SMART ring_2 115 156 IPR001841 -
Acco07g0255 313 MobiDBLite consensus disorder prediction 260 279 - -
Acco07g0255 313 ProSiteProfiles Zinc finger RING-type profile. 115 157 IPR001841 -
Acco07g0255 313 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 162 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0255 Acco-ChrAcco07 2757043 2757984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0255 16 292 C3H Transcription Factor Family AT1G53820 40.803 6.63e-63 200
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g0255 07 2757043 2757984 Acco07g0255 07 2757043 2757984 ECH