Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0248 ATGTTGGAGGATAGAAGGCTGGTAGTGCTGTTCATCAGCTTCAGTATTCTGGGTTTAATCCCCATTGTCATCAATGGCGAAACGGATCCAAATGATGCTGCTGCTCTGAGGGTATTATTTAGCAGCATGAATTCACCATCCCAGCTAGGTTGGCCTGCAAATGGTGATGATCCATGTGTGCAGCACTGGAAGGGCATTACCTGCTCGGGCAACCGAGTCACAGAGATCAAGTTACCTGGCCTTGGACTAACTGGAACGCTGGGCTACCAGTTACAAACCTTGACATCTGTGACCAACCTAGACATGAGTAACAACAATCTTGGAGGCTCTATACCATATCAACTTCCTCCAAACATGCTGCAATTAAACCTAGCTAACAACAACTTCACTGGGGAAGTAGTTTATTCTATTTCTAATATGACTGCTCTTACATACCTAAATCTTGGTCACAATCAACTCCAGGGCGCACTGAGTGTCAACTTTGAAAAGCTTTCTTCACTCTCCAGATTGGATCTCTCTTTCAATTCTCTGTCAGGTGACCTTCCTCAGAGTTTCACCTCACTTTCAAGCATCACCACCATGTATTTGCAAAACAACCAGTTTACTGGCACCATTGATGTCCTTGCTGGTCTTCCTCTTGCGGCTCTGAATGTGCAAAACAATCATTTTACAGGTTGGATACCAGAACAGTTGAAAAACATAAACCTACAGAAGGATGGTAATGCATGGAGCTCAGGCTCTGAACCTCCACCCCCACCCGGGACACCTCCTGCGACTAGAAGTACCCGAACTCACAAAACTAGTGGTGGCAGTGGAAGAAATGCCCCATCAGATACTGGTGCCATTGACAATGATAAAAAATCTAGTATAGGAGGTGGTGGCATTGCAGGAATAGTGATCTCCATCCTAATTGTTGGAGCAATTGTAGCATTCTTTCTGATGAAAAGGAGATCCAGGAAGCCATCTTTAGATATAGAAAATGTTGACAATCAGCCCTTTGCTCCTCTTTCATCAAATGAAGTGCATGAAATGAAGGCGGTGCAAACATCCTCTGTACCTGACACAAAGACTTTTGTTCCTTCCGCCTCATTCAATCTCAAACCTCCACCTATTGATCGTCACAAATCATTTGATGGAGATGAATTTTCAAAGAAACCTGATATTGTTAAGAAAACTGTAACAGCTCCTGCAAATGTAACATTATATTCTATAGCAGATCTACAGATTGCTACTGGCAGCTTCAGTGTGGATCACCTTCTTGGTGAGGGATCTTATGGACGCGTTTACCGTGCTCAATTTGATGATGGAGAGGTTCTTGCCGTGAAGAAGATAGATTCATCTGTCCTTCCTAGTGATATGTCTGAAGATTTTATTGAAGTTGTTTCAAACATCTCCCAGTTGCACCATCCCAATGTAACAGAGCTCATTGGTTATTGTTCAGAGCATGGACAACATCTTATGGTCTATGAGTTTCATAAGAATGGATCACTGCATGACTTCCTTCACTTGCCAGACGAACATAGCAAACCATTGATATGGAATTCCCGCGTCAAGATTGCTTTGGGAACTGCACGTGCTTTAGAGTACCTGCATGAAGTTTGTTCACCATCAGTTGTTCATAAAAATATTAAATCAGCCAACATATTACTCGATAGGGAGCTTAATCCTCATCTTTCTGACAGTGGATTGGCAAGCTATATTCCTAATGCTGACCAGGTATTAAACCAAAATGCTGGATCGGGTTACGAGGCACCTGAAGTTGGCTTGTGTGGTCAGTATACTCTGAAGAGTGATGTCTACAGCTTTGGAGTTGTCATGTTGGAGCTTCTTAGTGGACGAAAACCATTTGATAGCTCAAGGCCAAGATCTGAGCAGTCTCTAGTTCGGTGGGCAACTCCACAACTTCATGATATTGATGCATTGAGTAAAATGGTTGACCCTGCACTGGAAGGTCTATACCCTGTTAAGTCTCTTTCTCGGTTTGCCGATGTTATCGCTCTTTGCGTGCAGCCGGAGCCTGAATTCCGACCACCGATGTCCGAGGTTGTTCAAGCATTGGTCCGACTGGTGCAACGTGCAAACTTGAGCAGGCGAACAACGTTTGGATCATCTGACCATGGAGGATCCCAACGAGGAGATAACTCAGAAGCACAAGAAATGTAA 2163 0.4383 MLEDRRLVVLFISFSILGLIPIVINGETDPNDAAALRVLFSSMNSPSQLGWPANGDDPCVQHWKGITCSGNRVTEIKLPGLGLTGTLGYQLQTLTSVTNLDMSNNNLGGSIPYQLPPNMLQLNLANNNFTGEVVYSISNMTALTYLNLGHNQLQGALSVNFEKLSSLSRLDLSFNSLSGDLPQSFTSLSSITTMYLQNNQFTGTIDVLAGLPLAALNVQNNHFTGWIPEQLKNINLQKDGNAWSSGSEPPPPPGTPPATRSTRTHKTSGGSGRNAPSDTGAIDNDKKSSIGGGGIAGIVISILIVGAIVAFFLMKRRSRKPSLDIENVDNQPFAPLSSNEVHEMKAVQTSSVPDTKTFVPSASFNLKPPPIDRHKSFDGDEFSKKPDIVKKTVTAPANVTLYSIADLQIATGSFSVDHLLGEGSYGRVYRAQFDDGEVLAVKKIDSSVLPSDMSEDFIEVVSNISQLHHPNVTELIGYCSEHGQHLMVYEFHKNGSLHDFLHLPDEHSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDRELNPHLSDSGLASYIPNADQVLNQNAGSGYEAPEVGLCGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRSEQSLVRWATPQLHDIDALSKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANLSRRTTFGSSDHGGSQRGDNSEAQEM 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0248 720 Gene3D Transferase(Phosphotransferase) domain 1 493 705 - -
Acco07g0248 720 MobiDBLite consensus disorder prediction 259 284 - -
Acco07g0248 720 Pfam Protein tyrosine and serine/threonine kinase 416 686 IPR001245 GO:0004672|GO:0006468
Acco07g0248 720 ProSiteProfiles Protein kinase domain profile. 414 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0248 720 PANTHER LEUCINE RICH REPEAT KINASE 2 71 692 - -
Acco07g0248 720 ProSitePatterns Protein kinases ATP-binding region signature. 420 443 IPR017441 GO:0005524
Acco07g0248 720 MobiDBLite consensus disorder prediction 698 720 - -
Acco07g0248 720 CDD STKc_IRAK 420 689 - -
Acco07g0248 720 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 378 491 - -
Acco07g0248 720 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 492 700 - -
Acco07g0248 720 Gene3D Ribonuclease Inhibitor 29 249 IPR032675 -
Acco07g0248 720 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Acco07g0248 720 MobiDBLite consensus disorder prediction 239 286 - -
Acco07g0248 720 Gene3D Phosphorylase Kinase; domain 1 380 491 - -
Acco07g0248 720 Pfam Leucine rich repeat 121 177 IPR001611 GO:0005515
Acco07g0248 720 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 29 254 - -
Acco07g0248 720 SMART LRR_typ_2 94 122 IPR003591 -
Acco07g0248 720 SMART LRR_typ_2 164 187 IPR003591 -
Acco07g0248 720 SMART LRR_typ_2 140 163 IPR003591 -
Acco07g0248 720 SUPERFAMILY Protein kinase-like (PK-like) 396 686 IPR011009 -
Acco07g0248 720 SUPERFAMILY L domain-like 28 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0248 Acco-ChrAcco07 2704196 2710390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0248 1 699 Strubbelig Receptor Gene Family AT1G53730 65.871 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Acco07g0248 PK_Tyr_Ser-Thr 1.9e-41 CL0016