Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0247 ATGGCCCACCTCCTCCATCATCCTCGTTATAATATCTTCTTCTTCTTCCCATTTTCATTTTCTCACCTTCCTGTTCTCACTGAAAAGAATAAGCTTAAGAAGAACAGAATGGCTGAGGGACTGGATAAGCCTTTGCTTGACCCTGAGAATTTCAGTCGAGAAGGTGTTGATTTGGAACGCATACCATTGGAAGAAGTTTTTGAGCAGCTAAAAACATCGCCAAGAGGACTTTCATCTGATGATGCTGAAGCCAGACTAGCAATATTTGGCCCAAACAAGCTTGAAGAGAAGCCTGAAAATAAATTTTTGAAGTTTCTGAGTTTCATGTGGAACCCTCTATCATGGGTTATGGAAGCAGCTGCTGTAATGGCAATTGCTCTTGCTAATGGTGGAAGTGAGGGTCCTGATTGGCAAGACTTTGTAGGGATTATATGCCTACTGCTCATAAACTCCACCATTAGTTTTATTGAAGAGAATAATGCTGGAAATGCAGCAGCTGCACTAATGGCTCATTTAGCTCCGAAAACGAAGGTTCTGAGAGACGGTCAGTGGCAAGAGCAAGATGCATCTATTTTAGTACCTGGAGATATAGTCAGCATAAAGCTGGGAGATATCATTCCAGCTGATGCTCGCCTTCTCGAAGGAGACCCTCTGAAAATTGACCAGGCAAGTTCAGCTCTCACCGGAGAATCCTTGCCGGTAACCAAGAAGACAGGAGACGAAGTCTTTTCCGGTTCAACATGTAAGCATGGAGAGATTGAAGCTGTAGTCATTGCAACAGGAGTCAACACCTTCTTTGGAAAGGCAGCACACTTAGTTGATAGTACTGTAGTTGTTGGACATTTTCAACAGGTCCTAACCGCAATTGGGAACTTCTGCATTTGCTCAATAGCAGTAGGAATGATTATTGAAATAATAGTAATGTATCCTATAGAGAAACGTTCATATAGGGATGGAATCAACAACCTTCTTGTTCTCTTAATTGGAGGAATTCCCATAGCCATGCCAACTGTGCTATCTGTGACGCTTGCCATCGGCTCTCATCGGCTTTCACAGCAGGGAGCCATCACAAAGAGAATGACAGCAATTGAAGAAATGGCAGGCATGGACGTACTATGCAGTGATAAGACTGGAACTCTTACCCTGAATCGCCTTTCTGTTGACCGAAACCTTGTAGAGGTCTTTGACAACAATATGGACAAAGATATGGTTGTCCTGCTAGCAGCCAGGGCAGCTAGGGTGGAAAATCAGGATGCCATTGATGCTGCCATCGTTAACATGCTAGCTGATCCAAGGGAGGCACGTGCAAACATCACTGAAGTTCATTTTCTACCTTTCAATCCTGTAGACAAACGTACTGCTATTACATATTATGATTCTGAAGGCAATTGGTATAGGGCCAGCAAAGGTGCTCCTGAACAGATTCTAAATATGTGCAAAGAGAGAGATGAGATTGCCGGAAAAGTTCATGCCATCATTGACAAATATGCTGAAAGAGGCTTGCGATCTCTTGCAGTTGCTTTGCAGGAAGTTCCTGAAAAGTCCAAGGAGAGTCCCGGAGGTCCTTGGACTTTTTGTGGTCTGTTGCCCATGTTTGATCCTCCAAGACATGATAGTGCTGAGACAATACGTAGAGCACTTAACCTCGGAGTCAATGTTAAGATGATTACAGGGGATCAGCTAGCAATTGCAAAGGAGACGGGCCGAAGACTTGGTATGGGGACAAATATGTATCCTTCATCATCATTGTTCGGGCGTGACAGGGATGAAAATGAAGCCCTCCCAGTAGACGAGCTCATTGAAAAGGCAGATGGCTTTGCTGGTGTATTTCCTGAACACAAGTATGAAATTGTGAAAATTTTACAAGAAAAGAAGCATGTAGTTGGAATGACTGGAGATGGAGTCAATGATGCACCGGCTTTAAAGAAAGCAGATATTGGGATTGCCGTGTCAGATGCAACTGATGCTGCAAGAGGTGCAGCTGATTTAGTCTTAACTGAGCCCGGCTTAAGTGTTATTGTCAGTGCCGTGTTAACTAGCCGAGCTATATTTCAGAGAATGAAAAATTATACAATATATGCAGTCTCCATAACCATTCGTATAGTGCTTGGTTTTATGCTTCTGGCATTGATTTGGGAGTATGATTTTCCACCATTCATGGTCCTGATCATCGCCATACTGAATGATGGGACAATTATGACCATATCACAAGATCGTGTAAGGCCATCACCGACTCCAGACAGTTGGAAGCTGCCAGAGATATTCGCAACTGGAGTAGTAATTGGCACTTACCTTGCTTTGGTTACTGTTCTGTTCTACTGGGCAGTAGTGAAAACCACTTTCTTTGAGACACACTTCCATGTAGCCTCCTTATCCAGTGACAGTGAGAAAGTTTCATCCGCCGTATATCTTCAAGTCAGTATCATCAGCCAGGCTTTGATCTTTGTAACACGAAGTCAAGGATGGTCATTTCTAGAGAGACCTGGAACTCTCTTGATGTGTGCCTTTGTTGTAGCTCAACTGGTGGCCACCTTGATAGCTGTGTATGCACATATCAGCTTTGCCAAAATTACAGGCATTGGATGGGGATGGGCAGGTGTCATATGGTTATACAGTTTGATCTTCTACGTACCTTTGGACATTATCAAGTTCACAGTTCGCTATATCTTGAGTGGCGAAGCCTGGAATTTGGTATTTGACAGAAAGACTGCTTTCTCTTCTAAGAAAGACTATGGGAAAGAAGATAGGAGAACACAGTGGATTGTTTCTCAGAGAACCTTACAAGGATTTCCAGGCGGTACAGACATAGAGGTGAAGAATGGAATGGGAAGGCCAACTTCTTCTTTGATTGCTGAACAAGCCAGAAGACGCGCTGAAATCGCTAGGCTGGGAGAATTACACACTTTGAGAGGACATGTAGATTCTGTTTTGAGACTGAAGAACTTGGACCGGAGTGTTCTTCAATCAGCACACACAGTGTGA 2982 0.4356 MAHLLHHPRYNIFFFFPFSFSHLPVLTEKNKLKKNRMAEGLDKPLLDPENFSREGVDLERIPLEEVFEQLKTSPRGLSSDDAEARLAIFGPNKLEEKPENKFLKFLSFMWNPLSWVMEAAAVMAIALANGGSEGPDWQDFVGIICLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLRDGQWQEQDASILVPGDIVSIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTGDEVFSGSTCKHGEIEAVVIATGVNTFFGKAAHLVDSTVVVGHFQQVLTAIGNFCICSIAVGMIIEIIVMYPIEKRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLSVDRNLVEVFDNNMDKDMVVLLAARAARVENQDAIDAAIVNMLADPREARANITEVHFLPFNPVDKRTAITYYDSEGNWYRASKGAPEQILNMCKERDEIAGKVHAIIDKYAERGLRSLAVALQEVPEKSKESPGGPWTFCGLLPMFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLFGRDRDENEALPVDELIEKADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVSDATDAARGAADLVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWEYDFPPFMVLIIAILNDGTIMTISQDRVRPSPTPDSWKLPEIFATGVVIGTYLALVTVLFYWAVVKTTFFETHFHVASLSSDSEKVSSAVYLQVSIISQALIFVTRSQGWSFLERPGTLLMCAFVVAQLVATLIAVYAHISFAKITGIGWGWAGVIWLYSLIFYVPLDIIKFTVRYILSGEAWNLVFDRKTAFSSKKDYGKEDRRTQWIVSQRTLQGFPGGTDIEVKNGMGRPTSSLIAEQARRRAEIARLGELHTLRGHVDSVLRLKNLDRSVLQSAHTV 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0247 993 SFLD C1.7: P-type atpase like 355 683 - -
Acco07g0247 993 Gene3D - 174 260 - -
Acco07g0247 993 PRINTS H+-transporting ATPase (proton pump) signature 803 824 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco07g0247 993 PRINTS H+-transporting ATPase (proton pump) signature 631 647 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco07g0247 993 PRINTS H+-transporting ATPase (proton pump) signature 603 619 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco07g0247 993 PRINTS H+-transporting ATPase (proton pump) signature 489 507 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco07g0247 993 PRINTS H+-transporting ATPase (proton pump) signature 662 687 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco07g0247 993 NCBIfam plasma-membrane proton-efflux P-type ATPase 76 849 IPR006534 GO:0008553|GO:0016020|GO:0120029
Acco07g0247 993 SUPERFAMILY Calcium ATPase, transmembrane domain M 57 890 IPR023298 -
Acco07g0247 993 Gene3D - 370 668 IPR023214 -
Acco07g0247 993 FunFam Plasma membrane ATPase 385 532 - -
Acco07g0247 993 ProSitePatterns E1-E2 ATPases phosphorylation site. 375 381 IPR018303 -
Acco07g0247 993 FunFam Plasma membrane ATPase 525 679 - -
Acco07g0247 993 SUPERFAMILY HAD-like 369 678 IPR036412 -
Acco07g0247 993 FunFam ATPase 4 plasma membrane-type 621 858 - -
Acco07g0247 993 Gene3D - 136 858 - -
Acco07g0247 993 Gene3D - 946 993 - -
Acco07g0247 993 CDD P-type_ATPase_H 76 884 IPR006534 GO:0008553|GO:0016020|GO:0120029
Acco07g0247 993 SMART Cation_ATPase_N_a_2 57 129 IPR004014 -
Acco07g0247 993 PANTHER CALCIUM-TRANSPORTING ATPASE 59 926 - -
Acco07g0247 993 SUPERFAMILY Calcium ATPase, transduction domain A 174 273 IPR008250 -
Acco07g0247 993 PRINTS P-type cation-transporting ATPase superfamily signature 373 387 - -
Acco07g0247 993 PRINTS P-type cation-transporting ATPase superfamily signature 527 538 - -
Acco07g0247 993 PRINTS P-type cation-transporting ATPase superfamily signature 549 559 - -
Acco07g0247 993 PRINTS P-type cation-transporting ATPase superfamily signature 223 237 - -
Acco07g0247 993 PRINTS P-type cation-transporting ATPase superfamily signature 631 650 - -
Acco07g0247 993 PRINTS P-type cation-transporting ATPase superfamily signature 654 666 - -
Acco07g0247 993 SFLD p-type atpase 355 683 IPR044492 -
Acco07g0247 993 FunFam Plasma membrane ATPase 174 260 - -
Acco07g0247 993 Gene3D - 385 532 IPR023299 GO:0000166
Acco07g0247 993 Pfam Cation transporter/ATPase, N-terminus 61 123 IPR004014 -
Acco07g0247 993 Pfam E1-E2 ATPase 172 352 - -
Acco07g0247 993 NCBIfam HAD-IC family P-type ATPase 606 712 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco07g0247 993 NCBIfam HAD-IC family P-type ATPase 143 393 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco07g0247 993 Pfam haloacid dehalogenase-like hydrolase 369 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0247 Acco-ChrAcco07 2687208 2695973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0247 37 993 Primary Pumps ATPases AT1G17260 79.415 0.0 1528