Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0241 ATGGCGAACCTAGCTCTTGTGCTGAAATCCTTGCCTGTGGGGTTTGGATTCCGCCCAACGGATGAAGAGCTCATGAATCACTACCTGACCAAGAAATTGTTCGGCGAACATTCCGTTCTCCGGATTATGCCTGTGATTGAACTTTGTAAGCACGAGCCCTGGGAAATACCAGCTGTTGTTTTAGGTTCCTCGATCATCGAGTCGGACGACCCACAATGGTTCTTCTTCAGTCCTCGCGATTACAAGTACTCTAACAGTACTCGGTCTAACAGGGCAACAAGGGGTGGCTTCTGGAAACCCACTGGCATAGACAGGGAGATCAAGGTTAGAGGTTCCAACGACATCATTGGGACCAAGAAGACTCTGGTTTTCTATAGAGGTCGTGCTCGTCATGCCGTCAAGACTAACTGGGTCATTCATGAATACCACGCCGCCGTAGCAGGGGGGACCTTCGTTCTTTGCAAGTTAAAGAATGAACATGAGGAAGCAGAAGGGAGAACCGGTGATGAGGGGGAGCCAAGTAACTTTGTGCCTTCTGACTATGAAATTGTACCAAGTGAGGGTAGAATTCCAGATGCACGCGTTTGGCCAGCTGAGATGGGCTTGTTCTCTTTTTCTCAGATTGTCAATGGGCAGGAACTTTCTTTTCCATTTCCCCATACTGGAAATGACGACAGCAGTGTAAACGTGCCTTTTGAAACTACTGAAGAGGAAGACAATTTTGTGAGTTCATTCCTTGTCGATGATGAGGAATTGTACTTGAATAAAATGATAGCTTCTAACCATTCTCCCACCCACGCAGAACCTTTAGAGGTGTACTGGCTAAGCAGTGACACGGATGCAGAAGTTGTCTCTGTACAGTATGGATATATTCCAGAGACTTCAACTAAATCTAATAAAAATGATGGTCCAAGGGAAATCCTGCAAATATCAAAGGTTAACAGCTCTGAACTTTCTTCGAACGGAGAAGCAAATCAAGAGAGAAAGGGAAGATCCTTTCAAGATGATTTGGACTCTTCCTCTGGTGACACAAGCCCTGCTAGACCACTTAAGATCAATCGCATAAAGCATGTTGGCTCTGCTTCCACTTCAAAGACATGGAAAACCCAATATCGACGAAGATCAGGTGACTCTGTGTCACTGAGAGCTGGGGCTAGAAGATTTCAAACGCATAGGAAGATTTTAACCAAAGAGGCACATCATGAGGCTCAGAAAGAAAAACCGTTGCATTCAAACAATAATAAGAGAGAAGCACGGGTTACTGATAAAAGAAGTACTTCAAAATCCACAAGCAGTGAATCCTCTGGTGTTAATGGGAGGAATACTTTCATTCAACGGGAGACACCATCATCAAGCCAGAACCTTAATCCTCCATCCGTATATCTTTGCAATGTTGTTACAGGGCTTTTCCTGTTTGTAGTCATTATTTGGGAATTGCTATCATGCGGGAAGTTCTTTTAG 1461 0.4463 MANLALVLKSLPVGFGFRPTDEELMNHYLTKKLFGEHSVLRIMPVIELCKHEPWEIPAVVLGSSIIESDDPQWFFFSPRDYKYSNSTRSNRATRGGFWKPTGIDREIKVRGSNDIIGTKKTLVFYRGRARHAVKTNWVIHEYHAAVAGGTFVLCKLKNEHEEAEGRTGDEGEPSNFVPSDYEIVPSEGRIPDARVWPAEMGLFSFSQIVNGQELSFPFPHTGNDDSSVNVPFETTEEEDNFVSSFLVDDEELYLNKMIASNHSPTHAEPLEVYWLSSDTDAEVVSVQYGYIPETSTKSNKNDGPREILQISKVNSSELSSNGEANQERKGRSFQDDLDSSSGDTSPARPLKINRIKHVGSASTSKTWKTQYRRRSGDSVSLRAGARRFQTHRKILTKEAHHEAQKEKPLHSNNNKREARVTDKRSTSKSTSSESSGVNGRNTFIQRETPSSSQNLNPPSVYLCNVVTGLFLFVVIIWELLSCGKFF 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0241 486 MobiDBLite consensus disorder prediction 357 376 - -
Acco07g0241 486 Pfam No apical meristem (NAM) protein 12 143 IPR003441 GO:0003677|GO:0006355
Acco07g0241 486 MobiDBLite consensus disorder prediction 391 426 - -
Acco07g0241 486 Gene3D NAC domain 20 164 IPR036093 GO:0003677|GO:0006355
Acco07g0241 486 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 255 - -
Acco07g0241 486 ProSiteProfiles NAC domain profile. 11 159 IPR003441 GO:0003677|GO:0006355
Acco07g0241 486 MobiDBLite consensus disorder prediction 312 454 - -
Acco07g0241 486 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
Acco07g0241 486 MobiDBLite consensus disorder prediction 312 327 - -
Acco07g0241 486 MobiDBLite consensus disorder prediction 427 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0241 Acco-ChrAcco07 2628814 2631827 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0241 5 156 NAC Transcription Factor Family AT4G35580 54.375 8.25e-53 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco07g0241 NAM 8.2e-31 No_clan