Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0239 ATGGCGGACGAAGCTCCTGAGCCGGAATCCAAGATTGTGGGGTTTGAATTCCGGCCAACGGACGAAGAGCTCGTGAATTACTACCTGACCAAGAAATTGAACGGCGAAGATTCCGTTCTCCGGATTATCCCTGTGATTGAACTTTGTAAGCACGAGCCCTGGGAAATACCAGCTGTTGTTTTAGCGTCATCGAAGATCAAATCGGACGACCCACAATGGTTCTTCTTCAGTCCTCGGGATTACAAGTACCCTAACAGTAAGCGGTCTAACAGGTCAACAAAGCGTGGCTACTGGAAACCCACTGGCCTACCCACGAACATCAAGGTTCGAGGTTCCAACAAGATCATTGGGACCAAGAAGACTCTGGTCTTCCTTAGACGTCCTGCTCGTCGTGCCGACAAGACTGACTGGGTCATTCATGAATACCAGGCCCTAGCAGGGGGGACCTTTGTTCTTTGCAAGTTAAAGAATGAACATGAGGAAGCAGAAGGGAGAACCGGTGATGAGGGGGAGCCAAGCAACTTTATGCCTTCTGACTTTATACCAAGTGGGGGTAGAATTCCAGATGCACTCTCTTGGCCCGAAAACAATCTGGAATCAATGTTAAGGACACCAGATGAGATGAGCCTGCTCCCTTTACCTCCGATTGTCAATCAGCAGGAACTTTCTTTTCCATTTCCCGCAGGGTTCAATTCGCATACTGGAAATGACGACAGCATTGTAAATGCGCCTTTGGAATTTACTGAAGAGGAAGACAATTTTGTGAATTCAATCTTTGTTGATGATGAGAAATTGTACTTGAATAAAATGACAGCTCCTCTCCATTCTCCCAACCACTCAGAACCTTTAGAGGTGTACTGGCTAAGCAGTGACACAGATGCAGAAGTTGTCTCTGCACAGTATGGATATACTCCAGAGACTTCAATTAAATCTAGTAAAATTAATGGTCGAATGGAAATGGATTCAATATCAGAGGTTATCAGCTCTGAACTTTCTTCGAACCATGAAGCAAATCAAGAGAGAAAGGGAAGATCCTTTCAAGATGATTTGGACTCTTCCTCTGGTGACACAAGCCCTGCTAGACCACTTAAGATCAATCGGATAATGCATGTTGGCTCTGCTTCCACTTCAAAGACATCGAAAACCCAATATCGAAGATCAGCTGACTCTGTGTCACAGAGAGCTGGGGCTAGAAGATTTCAAACGCATAGGAAGATTTCAACCAAAGAGGCACATCATGAGGCTCAGAAAGAAAAACCGTTGCATTCAAACAATAATAAGAGAGAAGCACAGGTTACTGATAAAAGAAGTACTTCAAAATCCCCGAGTAGTGAATCCTCTGGTGTTAATGGGAGGAATACTTTCATTCAACGGGAGACACCATCATCAAGCCAGAACCTTGATCCACCATCCGAATATCTTTGCAATGTTGTTATAGGGCTTTTCCTGTTTGTAGTAATTATTTGGGAAATGCTATCATGCGGGAAGTTCTTTTAG 1497 0.4442 MADEAPEPESKIVGFEFRPTDEELVNYYLTKKLNGEDSVLRIIPVIELCKHEPWEIPAVVLASSKIKSDDPQWFFFSPRDYKYPNSKRSNRSTKRGYWKPTGLPTNIKVRGSNKIIGTKKTLVFLRRPARRADKTDWVIHEYQALAGGTFVLCKLKNEHEEAEGRTGDEGEPSNFMPSDFIPSGGRIPDALSWPENNLESMLRTPDEMSLLPLPPIVNQQELSFPFPAGFNSHTGNDDSIVNAPLEFTEEEDNFVNSIFVDDEKLYLNKMTAPLHSPNHSEPLEVYWLSSDTDAEVVSAQYGYTPETSIKSSKINGRMEMDSISEVISSELSSNHEANQERKGRSFQDDLDSSSGDTSPARPLKINRIMHVGSASTSKTSKTQYRRSADSVSQRAGARRFQTHRKISTKEAHHEAQKEKPLHSNNNKREAQVTDKRSTSKSPSSESSGVNGRNTFIQRETPSSSQNLDPPSEYLCNVVIGLFLFVVIIWEMLSCGKFF 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0239 498 MobiDBLite consensus disorder prediction 335 349 - -
Acco07g0239 498 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Acco07g0239 498 Pfam No apical meristem (NAM) protein 13 143 IPR003441 GO:0003677|GO:0006355
Acco07g0239 498 MobiDBLite consensus disorder prediction 370 397 - -
Acco07g0239 498 MobiDBLite consensus disorder prediction 403 435 - -
Acco07g0239 498 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Acco07g0239 498 SUPERFAMILY NAC domain 12 157 IPR036093 GO:0003677|GO:0006355
Acco07g0239 498 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 13 319 - -
Acco07g0239 498 MobiDBLite consensus disorder prediction 161 181 - -
Acco07g0239 498 MobiDBLite consensus disorder prediction 436 467 - -
Acco07g0239 498 MobiDBLite consensus disorder prediction 330 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0239 Acco-ChrAcco07 2620105 2623155 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0239 9 155 NAC Transcription Factor Family AT4G35580 52.564 5.63e-46 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco07g0239 NAM 8.6e-31 No_clan