Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0238 ATGGCGAACGTAGCTCTTGTGCTGGAATCCATGCCTGTGGGGTTTAGATTCCGTCCAACGGATCAAGAGCTCGTGAATCATTACCTGACCAATAAATTGATCGGAGATGATTCCCTTCCCCAGATTATCCCTGAGATTGACGTTTGTAAGAACGAGCCCTGGGATATACCAGCGTTCTCGATGATCAAGTCGGACGACCCAGAATGGTTCTTCTTCAGTCCTCGCGATTACAAGTACTCTAACAGTACTCGGTCTAACAGGGCAACAGAGCGTGGCTTCTGGAAAGCCACTGGCAAAGACAGGAACATCAAGGTTCGAGGTTCCAACGAGATCATTGGGACCAAGAAGACTCTGGTTTTCTATAGAGGTCGTGTTCCTCATGGCGTCAAGACTAACTGGGTCATTCATGAATACCACGCCGTAGCATTTCCTGCTGACCGGCGGACCTTTGTTCTTTGCAAGTTAATGAATAAACATGGGAAAGCAGAAGGGAGAACCGTTGATGAGGGGGAGCCGAGTAACCTTATGCCTTCTGACTGTGAAATTGTACCAAGTGAGGGTGAAATTCCAGATGCACGCTTTTGGCCCGAAAACTATCTGGAATCAATGTTTCAGACACAACAATCTGCAGATGAATATGAGATAAGCTTGCCCCCTTTATCTCCGTTTGTCAATGGGCAGGAACTTTCTTTCCCATTTTCCCCAGGATTCAATTCCCATACTGGAAACGACGACAGCAGTGTAAACGTGCCTTTTGAAACTACTGAAGAGGAAGACAATTTTGTGAACTCAATCTTTGTTGATGATGATGAGACATTGTATATGAATAAAATGATAGCTCCTATCCATTCTCCCATCCACTCAGAACCTTTAGAGGTGTACTGCCAAAGTAGTGACACAGATGCAGAAGTTGTCTCTGCACAGTATGGATATATTCCAGAGACTTCAATTAAATCCAGTAAAAATGATTATCCAAAAATCCTGTCAATATCAGAGGTTATCAGCTCTGAACTTTCTTCGAACCGAGAAGCAAATCAAGAGAGAAAGGGAAGATCCTTTCAAGATGATTTGGACTCTTCCTCTGGTGACACAACCCCTGCTAGACCACTTAAGATCAATCGGGTAAAGCATGTTGGCTCTGCTTCCACTTCAAAGACATGGAAAACCCAATATCAACGAAGATCAGCCGACTCTGTGTCACTTAGAGCTGGGGCTAGAAGATCTCTTGTACATAGGAGGATTTCAACCAAAGAGGCATATCATGAGGCTCAGAAAGAAACACCAGTGCATTCAACCAATAATAAGAGAGAAGCACAGGTTACTGATAAAAGAAGTACTTCAAAACCCCCAAGCAGTGAATCCTCTGGTGTTAATGGGAGGAATACTTTCATTCAACGGGAGACTCCATCATCAACCCAAAACCTTAGTCCACCATCCGTATATCTTGGCAATGTTGTTATAGGGCTTTTCTTGTTTGTAGTAATTATTTGGGAAATGCTATCATGTGAAGAGTTCTTCTAG 1521 0.4366 MANVALVLESMPVGFRFRPTDQELVNHYLTNKLIGDDSLPQIIPEIDVCKNEPWDIPAFSMIKSDDPEWFFFSPRDYKYSNSTRSNRATERGFWKATGKDRNIKVRGSNEIIGTKKTLVFYRGRVPHGVKTNWVIHEYHAVAFPADRRTFVLCKLMNKHGKAEGRTVDEGEPSNLMPSDCEIVPSEGEIPDARFWPENYLESMFQTQQSADEYEISLPPLSPFVNGQELSFPFSPGFNSHTGNDDSSVNVPFETTEEEDNFVNSIFVDDDETLYMNKMIAPIHSPIHSEPLEVYCQSSDTDAEVVSAQYGYIPETSIKSSKNDYPKILSISEVISSELSSNREANQERKGRSFQDDLDSSSGDTTPARPLKINRVKHVGSASTSKTWKTQYQRRSADSVSLRAGARRSLVHRRISTKEAYHEAQKETPVHSTNNKREAQVTDKRSTSKPPSSESSGVNGRNTFIQRETPSSTQNLSPPSVYLGNVVIGLFLFVVIIWEMLSCEEFF 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0238 506 Gene3D NAC domain 20 162 IPR036093 GO:0003677|GO:0006355
Acco07g0238 506 MobiDBLite consensus disorder prediction 377 397 - -
Acco07g0238 506 MobiDBLite consensus disorder prediction 338 462 - -
Acco07g0238 506 MobiDBLite consensus disorder prediction 411 443 - -
Acco07g0238 506 MobiDBLite consensus disorder prediction 444 462 - -
Acco07g0238 506 SUPERFAMILY NAC domain 3 158 IPR036093 GO:0003677|GO:0006355
Acco07g0238 506 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Acco07g0238 506 MobiDBLite consensus disorder prediction 342 356 - -
Acco07g0238 506 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 247 - -
Acco07g0238 506 Pfam No apical meristem (NAM) protein 12 139 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0238 Acco-ChrAcco07 2610592 2613675 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0238 5 158 NAC Transcription Factor Family AT4G35580 59.748 4.69e-61 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco07g0238 NAM 1.2e-34 No_clan