Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0235 ATGGTGGACGTCGCAGCTCCAATGCAGCAAGGTTTGCCGGGTTTCAGATTCCGTCCGACCGGTGAAGAACTCGTCGGCCACTACCTCCGCCACAAATTGTTGGCTGATGATCCTTCTACCTATAACATTATCCCTGAGATTGACGTGTCCAAGTTCGAACCTTGGGAATTACCAGCGATTTCACTGAACACATCGGACGATCCAGAATGGTATTTCTTCAGTCCTCGCCATTACAAGTATTCAAACGGTACTCGGTGGAATAGGAGAACGGCGCGTGGCTACTGGAAACTCACCGGTAAAGAGAGGAACATCCGAGATCCAGTTATTGACAATATTATTGGGAAGATGAAGACCCTAGTTTTCTACGATCATGGCATAAAAAGCAATTGGATTATTCATGAATACCACGATGCCATCTTCCTCCATCCCGATCAGAGAACTCATGTTCTTTGTAAGTTATTGAAGAAGCCGGAGAAGAAAACAGAAGAAAAATCAAATGAGTTGGTTTACGATGAAAGTGAGCCAAATGATCATATTGCTTCTGAATATGCAAATCCAGAAAATGTTTATACGATTCCAGATGTACAGTATTTCACATATATGGAAGATTTAATGATGACTCAAACACCTTTGGAGTCAGATGACCTTGGCAGCTCAATGATTCAAACACCTCAGGAAGTGGATTCAACAATGGAGGAGTCAGAAGAATTTGATTTCAAATCATTCTTGCGGTCGTCTCCAAGTAGGGATGATGAGTAA 759 0.4269 MVDVAAPMQQGLPGFRFRPTGEELVGHYLRHKLLADDPSTYNIIPEIDVSKFEPWELPAISLNTSDDPEWYFFSPRHYKYSNGTRWNRRTARGYWKLTGKERNIRDPVIDNIIGKMKTLVFYDHGIKSNWIIHEYHDAIFLHPDQRTHVLCKLLKKPEKKTEEKSNELVYDESEPNDHIASEYANPENVYTIPDVQYFTYMEDLMMTQTPLESDDLGSSMIQTPQEVDSTMEESEEFDFKSFLRSSPSRDDE 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0235 252 Gene3D NAC domain 20 161 IPR036093 GO:0003677|GO:0006355
Acco07g0235 252 ProSiteProfiles NAC domain profile. 11 156 IPR003441 GO:0003677|GO:0006355
Acco07g0235 252 Pfam No apical meristem (NAM) protein 13 136 IPR003441 GO:0003677|GO:0006355
Acco07g0235 252 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 13 173 - -
Acco07g0235 252 MobiDBLite consensus disorder prediction 211 228 - -
Acco07g0235 252 SUPERFAMILY NAC domain 3 156 IPR036093 GO:0003677|GO:0006355
Acco07g0235 252 MobiDBLite consensus disorder prediction 234 252 - -
Acco07g0235 252 MobiDBLite consensus disorder prediction 211 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0235 Acco-ChrAcco07 2575757 2577113 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0235 4 173 NAC Transcription Factor Family AT4G35580 48.333 1.91e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco07g0235 NAM 5.4e-31 No_clan