Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0234 ATGGCGAACGTTGGTCTTGTCCCGGAACCATTACCTGCGGCGTTTGGATTCCGTCCAACGGATCAAGAGCTCGTGAATCACTACCTGACCAAGAAATTAAACGGCGAAGATTCCGTTCTCGAGATTATCCCTGTGATTGACGTTTGTAAGCACGAGCCCTGGGATATACCAGCGATGATCGAGTCGGACGACCCAGAATGGTTCTTCTTCAGTCCTCGCGATTACAAGTACTGTAACATTACTCGGTGTAACAGGGCAACAATGCGTGGCTACTGGAAAGCCACTGGCAGAGACAGGAAAATCAAGGCTCGAGGTTCCAACGAGATCATTGGAACCAAGAAGACTCTGGTTTTCTATACAGGTCGTGCTCCTCGTGCCGTCAGGACTAACTGGCTCATTCATGAATATCACGCCGAAGCATTTCCTGCTGACCAGAGGACCTTTGTTCTTTGCAAGTTAATGAATAAGCACGAGAAAGCAGAAGGGAGAACCGGTGATGAGTGGGAGCCAAGTAACTTTATGCCTTCTGACTATGAACTCTTGTCCCGAAAACTATCTGGAATCAATGTTAAGGACACCAGGTGA 585 0.4821 MANVGLVPEPLPAAFGFRPTDQELVNHYLTKKLNGEDSVLEIIPVIDVCKHEPWDIPAMIESDDPEWFFFSPRDYKYCNITRCNRATMRGYWKATGRDRKIKARGSNEIIGTKKTLVFYTGRAPRAVRTNWLIHEYHAEAFPADQRTFVLCKLMNKHEKAEGRTGDEWEPSNFMPSDYELLSRKLSGINVKDTR 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0234 194 Gene3D NAC domain 20 161 IPR036093 GO:0003677|GO:0006355
Acco07g0234 194 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Acco07g0234 194 Pfam No apical meristem (NAM) protein 12 137 IPR003441 GO:0003677|GO:0006355
Acco07g0234 194 ProSiteProfiles NAC domain profile. 11 156 IPR003441 GO:0003677|GO:0006355
Acco07g0234 194 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 12 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0234 Acco-ChrAcco07 2560933 2562330 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0234 9 167 NAC Transcription Factor Family AT4G35580 56.287 1.97e-56 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco07g0234 NAM 2.3e-33 No_clan