Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0233 ATGGCTGAGACAACCATGGCTCCGGCGGAGAGGCCTATGCGTGTTGGGTGGAGGTTTCATCCGACCGACCAAGAGCTCGTTAGTTACTTCCTCCGCCACAAATTGAAGGCTGACGATCTGACCATTGACGACACCATCCCTGAGATTAACGTCTGCAAGGGTGAACCCCGGGATTTATTAGATTGGGCCACTACCGCTTCATCAACCAAGTTTGATGAATCACAGTGCTTTTTCTTCAGTCCTCGCGACTATAAGTACTCTAACAGTAATAGATGGAACAGAACAACCCCGCGTGGTTTCTGGAAAGTCACCTGTAGAGACCGTAAAATCACATGTAAAGACACCAACAAAGTCATTGGAACAAAGAAGACTCTAGTTTATTATAAAGGACGTGTAACTCATGGAATCAAAACTAACTGGATTATTCATGAATTCCATGATTTCCAATTATCTCAAGACCAGAGGACTCATGTTCTTTGTTGGTTAAGGGAGAATAAGAAGAAGAAAACAACAGAAAAAATTCATCAACTAGTTGATGATGAAAAGCGGACATTTAACCATATAATATGTGAATATGAAAATCAAACAAATATATGTACGAATTCAGAAGAACAAAATGGAACAAGTATATGTACAAATTCAGAAGAACAAAATGGAACAAGTATATGTACAAATTCAGAAGAACAAAATCGTACAAATATATGTATGAATTCAGAAGAACAGAGTTCAATGATTCAAGTATCTTCCCAATTAGAAAAAGACTCAATGTATCAAATATCTTCCCAGTCAAATGGAATTAACCCAATAGAACAAATATATTCTCAATCATATGAAGCCCTTGGTTCAATGATTGAATCACCCTTCCGATTAGATGAAGAATTAGCTTCAATTATTCACACACCACTACCTGAATCAAATTTTCCTGTACCAGTGGACTTAGTGATTCAAACACCTTTGAAATCAGATGAAAAATCAGCCTTAATTATTCATACACCACCATCTAAATCAAATTTTACTATTGCTTCTGAGTATGCAAATCTGGCAAATGTTTGTCCGATTCCAGAAGTACATTGTCTCACACATATGGAGGATTCAATGATGACTCAAACAACTTCGCAGTCAACCATGGAGGAGTCAGAAAATTTTGATATCAGATCATTCTTCTGCTCGTCTCCAAGCAGGGATGATGAGTAA 1194 0.3769 MAETTMAPAERPMRVGWRFHPTDQELVSYFLRHKLKADDLTIDDTIPEINVCKGEPRDLLDWATTASSTKFDESQCFFFSPRDYKYSNSNRWNRTTPRGFWKVTCRDRKITCKDTNKVIGTKKTLVYYKGRVTHGIKTNWIIHEFHDFQLSQDQRTHVLCWLRENKKKKTTEKIHQLVDDEKRTFNHIICEYENQTNICTNSEEQNGTSICTNSEEQNGTSICTNSEEQNRTNICMNSEEQSSMIQVSSQLEKDSMYQISSQSNGINPIEQIYSQSYEALGSMIESPFRLDEELASIIHTPLPESNFPVPVDLVIQTPLKSDEKSALIIHTPPSKSNFTIASEYANLANVCPIPEVHCLTHMEDSMMTQTTSQSTMEESENFDIRSFFCSSPSRDDE 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0233 397 Gene3D NAC domain 22 171 IPR036093 GO:0003677|GO:0006355
Acco07g0233 397 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 15 223 - -
Acco07g0233 397 SUPERFAMILY NAC domain 7 162 IPR036093 GO:0003677|GO:0006355
Acco07g0233 397 ProSiteProfiles NAC domain profile. 13 165 IPR003441 GO:0003677|GO:0006355
Acco07g0233 397 Pfam No apical meristem (NAM) protein 15 146 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0233 Acco-ChrAcco07 2554984 2557213 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0233 6 145 NAC Transcription Factor Family AT5G17260 46.429 9.20e-38 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco07g0233 NAM 6.1e-28 No_clan