Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0230 ATGGCGGAGGAAGCTCCTCTGCAGCAAGATAGGCCGCAGCCGGTAGGGTACAGATTCCATCCGACGGATGAAGAGCTCGTCGGTCACTACCTTCGCCACAAATTGTTGGCTGATGATCCTTCCATCCACAACACCATCTCTGAGATTGACATCTGCAAGTTTGAACCCTGGGATTTACCACCGTTTTCACAGATCAAATCCGACGATCCGGAATGGTATTTCTTCAGTCCTATCAAACACAAGTACTCAAACAGTACCAGGTCTCATCGGGCAACATCGCGTGGCTACTGGAAAGCCACCGGTAGAGTCAGGAAAATCCGGGATCCAGTTACTGACAATGTTATTGGGACTAAGAAGAGCTTAGTTTTCTGTCGAGGAAAAAATGTTCCTCAGATTAGAAATAACTGGGTTATTCATGAATACCAGGATGCCAACTTTCCTCAACATGTGAGAACACATGTTCTATGTAAGTTATTGAAGAAACCCGAGAAGAAAACAAAAGAAAAAACGGATGAGCTGGTTCGTGATGAAAGCGAGCCAAATGACCCTATCGCTTCCGAGTATGAGAATCAAGCAAATGCAGAAGTACCGTATTTTTCAGATATGGATTCATTGTTGATTCAAACACATGGGGAGTCGAATGGCTCATCAAGAATTCAGACATCTTCTGAAGTGGACTCGACCGTTGAGACGCCACACGGCGACTCAGAAGAATTTGACGTCGATTCGTTCTGGCTGTTTCCTGATGATGACCATTACTTGCCTCCAAGTATGGATGGTTGGAAATGGTAA 792 0.452 MAEEAPLQQDRPQPVGYRFHPTDEELVGHYLRHKLLADDPSIHNTISEIDICKFEPWDLPPFSQIKSDDPEWYFFSPIKHKYSNSTRSHRATSRGYWKATGRVRKIRDPVTDNVIGTKKSLVFCRGKNVPQIRNNWVIHEYQDANFPQHVRTHVLCKLLKKPEKKTKEKTDELVRDESEPNDPIASEYENQANAEVPYFSDMDSLLIQTHGESNGSSRIQTSSEVDSTVETPHGDSEEFDVDSFWLFPDDDHYLPPSMDGWKW 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0230 263 ProSiteProfiles NAC domain profile. 13 161 IPR003441 GO:0003677|GO:0006355
Acco07g0230 263 MobiDBLite consensus disorder prediction 211 229 - -
Acco07g0230 263 MobiDBLite consensus disorder prediction 166 185 - -
Acco07g0230 263 SUPERFAMILY NAC domain 11 161 IPR036093 GO:0003677|GO:0006355
Acco07g0230 263 Gene3D NAC domain 22 167 IPR036093 GO:0003677|GO:0006355
Acco07g0230 263 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 209 - -
Acco07g0230 263 MobiDBLite consensus disorder prediction 166 182 - -
Acco07g0230 263 Pfam No apical meristem (NAM) protein 14 142 IPR003441 GO:0003677|GO:0006355
Acco07g0230 263 MobiDBLite consensus disorder prediction 211 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0230 Acco-ChrAcco07 2540641 2542093 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0230 14 259 NAC Transcription Factor Family AT4G35580 39.453 1.31e-45 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco07g0230 NAM 1.3e-32 No_clan