Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0228 ATGGCGACCTCTCTCTCTCATTTTCCTCAATCATCGTCTCCTTTAAATTCATGGCTTCCCCTTTCCGACGCCTATGTTAATAGAGCTGAGACAACCATGGCTTCGGCGGATCTAGCTCCGGTGGAGAGATCTATGCCAGTTGGATACGGTTTTCATCCGACCGACCAAGAGCTCGTCGGTCACTACCTCCGCCACAAATTGAAGGGTGACGATCTTTCGATTCACGACACCATCCCTGAGATCGGCGTCTGCAAGGGTGAACCCTGGGATTTATTAGATTGGGCTGCTTCCGCTTCAGCAGCCAAGTTTGATGAATCACAATGCTTTTTCTTCAGTCCTCGCGACTATAATTACTCTACTACCTTGCGTGGCTTCTGGAAAGTAACTGGTAGAGACTATAAAATCACAAGTAAAGGCACTAACAAAGTCATTGGGAACAAGAAGACCTGGTTTACCATGAAGGTCCTGCTCCTTGTGTGGAATCAAAACTAA 492 0.4715 MATSLSHFPQSSSPLNSWLPLSDAYVNRAETTMASADLAPVERSMPVGYGFHPTDQELVGHYLRHKLKGDDLSIHDTIPEIGVCKGEPWDLLDWAASASAAKFDESQCFFFSPRDYNYSTTLRGFWKVTGRDYKITSKGTNKVIGNKKTWFTMKVLLLVWNQN 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0228 163 Gene3D NAC domain 54 154 IPR036093 GO:0003677|GO:0006355
Acco07g0228 163 Pfam No apical meristem (NAM) protein 46 149 IPR003441 GO:0003677|GO:0006355
Acco07g0228 163 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 45 149 - -
Acco07g0228 163 ProSiteProfiles NAC domain profile. 45 163 IPR003441 GO:0003677|GO:0006355
Acco07g0228 163 SUPERFAMILY NAC domain 35 150 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0228 Acco-ChrAcco07 2517986 2518567 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0228 44 149 NAC Transcription Factor Family AT1G33060 46.903 6.90e-25 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco07g0228 NAM 3.6e-20 No_clan