Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0226 ATGGCGGATCCGACGACGATGCAGAAACGAGTGCCTGTAGGGTACAGATTCTGTCCGACTGAGGAAGAGCTCGTCGCTTACTACCTCCGCCACAAATCGATGGCTCATGATCCTCTCATTTATAACACCATCCCTGAGATTGACGTGTGCAAGTACGAACCTTGGGAATTACCAGCTTTTCCGGAGTTGGAGCAAGATGACTCAGAATGCTATTTCTTCAGTCGTTGCGATTACAAGTACTCTAACCGTACGCGGTTTAATAGGACAACATCACTTGGCTTCTGA 285 0.4807 MADPTTMQKRVPVGYRFCPTEEELVAYYLRHKSMAHDPLIYNTIPEIDVCKYEPWELPAFPELEQDDSECYFFSRCDYKYSNRTRFNRTTSLGF 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0226 94 ProSiteProfiles NAC domain profile. 11 94 IPR003441 GO:0003677|GO:0006355
Acco07g0226 94 Gene3D NAC domain 20 94 IPR036093 GO:0003677|GO:0006355
Acco07g0226 94 SUPERFAMILY NAC domain 5 93 IPR036093 GO:0003677|GO:0006355
Acco07g0226 94 Pfam No apical meristem (NAM) protein 12 93 IPR003441 GO:0003677|GO:0006355
Acco07g0226 94 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0226 Acco-ChrAcco07 2466106 2466503 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0226 11 94 NAC Transcription Factor Family AT5G24590 51.190 1.61e-22 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco07g0226 NAM 1.2e-16 No_clan