Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0225 ATGGCGGAGGAAGCTCCTATGCAGCAAGATAGACCGCAGCCGGTAGGGTACAGATTCCATCCGACGGATGAAGAGCTCGTCGGTCACTACCTCCGCCACAAATTGTTGGCGGATGATCCTTCCATCCACAACACCATCTCTGAGAATGACATCTGCAAGTTCGAACCCTGGGATTTACCACGTATCTTAATGCCGGCCCCACATCTTCTTCTTCTTTTAAATTTGTCATTCTTCAATAATCTTGTAATAGTGCGCCGTTTTGATTTTGCATTTTTTCGTTCTGTTTCAGCGTTTTCACAGATCGAATCGGACGACCCGGAATGGTATTTCTTCAGTCCTATCAAATACAATTACTCAAACAGTACTAAGTCTCATAGGGCAACATCGCGTGGCTACTGGAAAGCCACCGGTAGAGACAGGAAAATCCGGGATCCAGTTACTGACAATGTTATTGGGACTAAGAAGACCTTAGTTTTCTATCAAGGAAAAAATGTTCCTGACATTAGAAATAACTGGATTATTCATGAATACCACCACGCCAGCTTTCCTCAACATGTGAGAACACATGTTCTATATAAGTTATTGAAGAAACCCGAGAAGAAAACAAAAGAAAAAACGGATGAGCTGGTTCGTGATGAAAGCGAGCCAAATGACTCTATCGCTTCCGAGTATGAGAATCAAGCAAATCCAGAAGTAAGCAGACACTCTTGA 711 0.4318 MAEEAPMQQDRPQPVGYRFHPTDEELVGHYLRHKLLADDPSIHNTISENDICKFEPWDLPRILMPAPHLLLLLNLSFFNNLVIVRRFDFAFFRSVSAFSQIESDDPEWYFFSPIKYNYSNSTKSHRATSRGYWKATGRDRKIRDPVTDNVIGTKKTLVFYQGKNVPDIRNNWIIHEYHHASFPQHVRTHVLYKLLKKPEKKTKEKTDELVRDESEPNDSIASEYENQANPEVSRHS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0225 236 ProSiteProfiles NAC domain profile. 13 197 IPR003441 GO:0003677|GO:0006355
Acco07g0225 236 MobiDBLite consensus disorder prediction 200 236 - -
Acco07g0225 236 Gene3D NAC domain 22 210 IPR036093 GO:0003677|GO:0006355
Acco07g0225 236 SUPERFAMILY NAC domain 9 63 IPR036093 GO:0003677|GO:0006355
Acco07g0225 236 SUPERFAMILY NAC domain 102 197 IPR036093 GO:0003677|GO:0006355
Acco07g0225 236 Pfam No apical meristem (NAM) protein 14 178 IPR003441 GO:0003677|GO:0006355
Acco07g0225 236 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 14 214 - -
Acco07g0225 236 MobiDBLite consensus disorder prediction 200 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0225 Acco-ChrAcco07 2461309 2462262 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0225 16 191 NAC Transcription Factor Family AT3G10480 42.135 3.70e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco07g0225 NAM 4e-31 No_clan