Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0224 ATGGCGGATCCGACGAGGATGCAGAGACGTATGCCTGTAGGATACAGATTCTGTCCGACCGAGGAAGAGCTCGTCTCTTATTTCCTCCGCCACAAATTGATGGCTCGTGATCCTTCCATTTATTATACCATCCCAGAGATTGACGTTTGCAAGTACGAACCTTGGGAATTACCAGCTTTGGCTGCTTCAGCGTTTCCGGAGACGGAGCAAGATGACTCAGAATGCTATTTCTTCAGGCGTTGCGATTACAAGTACTCTAACAGTACTCGGTTTAATAGGACAACACCACTTGGCTACTGGAAAATCACCGGTAAAGACAGATCAATCAAGGACCATGACACCAAGAATGTCATTGGGAATAAGAAAATTCTAGTATATCACAAAGGGCGTTTTCCTGATGGGATCCGATGCAATTGGGTCATTCATGAATATCATGATGACATGTTTCCTCCTGAACAAAGGAGCTATGTAGTATGCAAACTAATGAAGAAAGATGAAAAGAAAACCAAAGAAAAAACTAATGACTTTGAGCACGAAGCAATTGGCCACGAAATGGAGTCCAATAATCATACGGATTTTGGGTATGAAAACCCAGCAAATTTCTGCATCCCTTCAAAGGAACATTATTTATCAAATATGAACCCAATAGTTCAAACATCTTTTCACCCCGAAGTTATGGATTCTGTAGTTCATGGATCTTTCCAACCAAACGAAGCTATAAACTCAAGGACTTGGACTTGTTTGCAACCAAATGAAGAATATCAGTTAAATAATGAAGATATAGACTCAATGATTCAAGGATACCTGTCCAATGAAGTTTTATACCACCAGAACTGA 837 0.4062 MADPTRMQRRMPVGYRFCPTEEELVSYFLRHKLMARDPSIYYTIPEIDVCKYEPWELPALAASAFPETEQDDSECYFFRRCDYKYSNSTRFNRTTPLGYWKITGKDRSIKDHDTKNVIGNKKILVYHKGRFPDGIRCNWVIHEYHDDMFPPEQRSYVVCKLMKKDEKKTKEKTNDFEHEAIGHEMESNNHTDFGYENPANFCIPSKEHYLSNMNPIVQTSFHPEVMDSVVHGSFQPNEAINSRTWTCLQPNEEYQLNNEDIDSMIQGYLSNEVLYHQN 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0224 278 Pfam No apical meristem (NAM) protein 12 145 IPR003441 GO:0003677|GO:0006355
Acco07g0224 278 Gene3D NAC domain 20 170 IPR036093 GO:0003677|GO:0006355
Acco07g0224 278 ProSiteProfiles NAC domain profile. 11 164 IPR003441 GO:0003677|GO:0006355
Acco07g0224 278 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 184 - -
Acco07g0224 278 SUPERFAMILY NAC domain 6 164 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0224 Acco-ChrAcco07 2455537 2456793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0224 11 181 NAC Transcription Factor Family AT3G49530 46.369 1.03e-43 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco07g0224 NAM 6.5e-28 No_clan