Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0219 ATGGAATTGACACAAGAAGCTGCAAAAGCGTCTTCAGATTATAGCAGAGAAGAAGAATCACGGGAGGAGGAAGAAGATTTATTAGGTGAAACCAGTAATAAAGAAAACAGCTGTAAGCAATACTATCCCTTTTCTTCTTCTTCTAATTCTTCACATCCAAATCTATGGTTGGGGATGCATCATCAACAACAACAACAATCTCCGGAGGCCACAACCCCATGTGAATCTCACAATTCATCATCTGGGTTAGGGTTATTACACCATCATGATACACCATCTAATTCCAATTCGGCCATTGTTAACAACAATCCCAACAAGAAGCTGGACTTCATGGACTTATCACTCGGAAACAAGAAGGAAGAAGATGAAGCTAACAACAACAACAAAGCTATTGAGAAAGAGCACATGTTTGATAAGGTTGTGACACCCAGCGATGTGGGCAAACTGAACCGCCTCGTCATACCAAAACAACACGCCGAGAGGTACTTCCCGCTCGATTCATCCTCCAACGAGAAAGGCTTGCTTTTGAATTTCGAGGACCGGAACGGCAAGCTATGGCGGTTCCGATACTCTTACTGGAATAGCAGCCAGAGCTATGTGATGACCAAAGGCTGGAGCCGTTTTGTTAAAGAGAAGAAGCTCGACGCCGGTGACATTGTTTCCTTCCAACGCGGCCTCGGTGAATTGTATAGACATATGTTATACATAGACTGGAGGCGCCGCCCCGACTACACCGCTGCCGCCGATCATCTCCATCATCATCATCGCCATGGCGCCGCCGCTGCAATTACGCCGTTACTCCTCCCAAATCAGTATTCAATCAGATGGGATGGTAGATTATACTCGGTCCCCACGGTGGCGTCACCGGTGATTCCTCAACCCCCACCACCACCGCGACACCACGAACAATTCCAGCAAGTCAACTACAACAATTACCCCTTTCAGCAGCAACAGCAACAATTACTTCAGTACCAGCGACAAGTACATCACCACCACCACCAGCTCTATAGTGGAAGTCAAGGAAGCTATAACGAGCTGAATTTGGGATCTGGGTCATCGCTCTATTACCTGAGGACACCGTCAGCGTTGGCGGCTCCGGGAGATCGGAATTTAATGGAGCAGCGAGAGGGAGGAGGCGGCAATGTAAGTCCAATGATAATTGATTCGGTTCCAGTAGTTCATGGTAAGAGCAGCTGTTCTACTAGCAGTGGTAGAATAATTGCTGATACTACCGCAAAGAAGCTTAGGCTATTTGGTGTGAACATGGAATGTTCTTCTTCATCCAACACAATAGGAAATCATGTCCCAATGGGTGATTCATCACTTTCCTCACCAAATCTTGAGTATTTGAGAGAATCGCATCATCATCATCATGAAGAAGAACAAGAAGAAGACCCATCACTGTCTTCATCATCATCAAGGTTTGCAGATCAAAAGGGGAAAACTTCTGTGCTTTTTGATTTGAGCCCCTCCTTCCAATACCGACACTAG 1491 0.4608 MELTQEAAKASSDYSREEESREEEEDLLGETSNKENSCKQYYPFSSSSNSSHPNLWLGMHHQQQQQSPEATTPCESHNSSSGLGLLHHHDTPSNSNSAIVNNNPNKKLDFMDLSLGNKKEEDEANNNNKAIEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSSNEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGLGELYRHMLYIDWRRRPDYTAAADHLHHHHRHGAAAAITPLLLPNQYSIRWDGRLYSVPTVASPVIPQPPPPPRHHEQFQQVNYNNYPFQQQQQQLLQYQRQVHHHHHQLYSGSQGSYNELNLGSGSSLYYLRTPSALAAPGDRNLMEQREGGGGNVSPMIIDSVPVVHGKSSCSTSSGRIIADTTAKKLRLFGVNMECSSSSNTIGNHVPMGDSSLSSPNLEYLRESHHHHHEEEQEEDPSLSSSSSRFADQKGKTSVLFDLSPSFQYRH 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0219 496 FunFam B3 domain-containing protein 130 251 - -
Acco07g0219 496 MobiDBLite consensus disorder prediction 452 480 - -
Acco07g0219 496 SUPERFAMILY DNA-binding pseudobarrel domain 134 237 IPR015300 -
Acco07g0219 496 ProSiteProfiles B3 DNA-binding domain profile. 137 237 IPR003340 GO:0003677
Acco07g0219 496 SMART B3_2 137 242 IPR003340 GO:0003677
Acco07g0219 496 MobiDBLite consensus disorder prediction 33 104 - -
Acco07g0219 496 CDD B3_DNA 135 224 IPR003340 GO:0003677
Acco07g0219 496 MobiDBLite consensus disorder prediction 452 467 - -
Acco07g0219 496 Pfam B3 DNA binding domain 137 241 IPR003340 GO:0003677
Acco07g0219 496 Gene3D - 130 257 IPR015300 -
Acco07g0219 496 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 24 454 IPR044800 GO:0003700
Acco07g0219 496 MobiDBLite consensus disorder prediction 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0219 Acco-ChrAcco07 2428686 2430176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0219 112 430 RAV Transcription Factor Family AT2G46870 46.667 8.15e-77 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Acco07g0219 B3 6.9e-28 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g0219 07 2428686 2430176 Acco07g0219 07 2428686 2430176 ECH