Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0216 ATGGACGCATACTCCTCTGGAGGGGAAGTGATTGTTAAGACAAGAAAACCATATACAATCACAAAGCAAAGAGAAAAATGGACCGAGGAGGAGCATAATAGGTTTCTAGAAGCCTTAAAGCTCTATGGGAGAGCATGGCAGCGCATCGAAGAGCATATAGGAACAAAGACTGCAGTGCAAATCAGGAGCCATGCGCAGAAATTCTTTTCAAAGCTGGAGAAAGAGGCTCTTGAAAAGGGTGTTCCAATAGGACAAGCTCTTGACATAGACATCCCTCCTCCAAGGCCAAAAAGAAAGCCAACTAATCCTTATCCTCGGAAGACCAGTACTGGCTCTCCAGCATTACACAATGGAATAAAAGACGGCAAACTAACTTCTGTTTCACCTTCGCATGGTAAACCACTGGACTTGGAGAAAGAACCACCTCCAGAGGAATCTAATGGAGATGAAAGACCAGTAAGTGTTACTGAAAATAAGGATGAGAACTGCTCAGGAGTATTTGCTATCCCACAGGAGGCACCCTGTTCCTCTATATCTTCAGCAAAAAACAGATCAATTTCATTGTCAGTGCCTCTGAGAAACTCCTGCATTTTAAGGGAGTTCATACCTTCAGTAAGAGTGGGAACTACACGAGATGAAACAAATAAATCTTCTGTCACTGTTGAACTTGAAAATCAGAAGTGCAAGATAGATGATGGAAAAAAACTACAACAGACAAAAGCCTCTAAATTGGAGGGTTCTGATGCTTCAGGTGTAAAATTGGTTCAAAGTCAGAAAACAGATTATCTCAATTGTGCATTAACAAAAGATAGGATGCAAGACAATCAGAATTACCAAAGGCATGTCCCAGGGCATGGTATTGATGGGAACCAAGGAACAAGTACACAAAACCCTCCCCAAGACATGCTATTACGAGACTCTATATTTCAGCCTGTGGGAAAGGTTAGTGGGCAACCTAGTATTTTCACAGGTTCAGCTGCATCAAACACAAGTGAAAGTATGTATCCTCCCTTCACACAAGTTCTCTGTAGTCAAGACCATTGCCATTCATTTTTTCACATGTTCCCCACATTCTCAAGTCTCTTTGTCTCCGCCCTAATGCAAAATCCTGCATCCCATGCTGCAGCTAGTTTTGCTGCTACATTTTGGCCCCACACAAATGCAGAAGCTTCAGCTGATTCTCCTGCTTCCTCTCAAGGAGGTTTCACAACAAGACAAATTGGCTCTCCTCCAAGTATGGAAGCTATTGCTGCTACTACTGTGGCTGCTGCAACCGCATGGTGGACTGCCCATGGACTGCTTCCTTTGTGTGCTCCACTCCATTCTGCTCTCTCCTCTCCTCCTGCATCTGCGGTGTTAGTTCCTTCCATGAACACTGGCGAAGCACAAGGAGCTGAAAAAGATCAGAAAGAGACTACAGTTGAGAATCCTCCTCAGCAAGATCAGATGCCAAATGGAGAATATTCAGAAGCTCTGCAAGCTCAGCATTCAGACTCCACGTCACAAGCTGTTTGTTCATCAGATTCTAAGAGTGGAGATGCCAAGTTAACCACTTCACCTGATGCTGCTGAACATGGCAAGAACGATGCAATGTCTGAGCACCCTGTTTCCAACAAAACCAACGGAAGAAAATTGGTTGACCGTTCTTCATGTGGCTCCAACACAACCTCTAGTAGTGATATTGAGACTGATGCATTAGAGAAGAACGAGAAAGGGAAGGAAGAGTCCTTAACACCAGATGCAAACCACTTAACAACTGACCCTAGTAATCGCCGAAGTAGGAGTTCTGGCAACCTTACTGATTCTTGGAAAGAAGTCTCTGAAGAGGGGCGACAGGCCTTTCAGGCTCTCTTCTCCAGAGAGGTTTTGCCACAAAGCTTTCCACCACCACACTTGGAAAAGGACATTCAGAAAGACCACAAAAAGGAGCATCATGAGCAGAACACAGTTGAGAAATATGGAGACCTTGACAGCAACAAATACAGATCTGATCTGGTAGGGGTAAAGAAGAACATGCCATTTGTAGAAAACACACAAGAAGAGGAGGGACCTCTAACCATAGGGCTGGGACAAGGAAAGCTCAAGGCATGTCGAACCGGATTTAAACCTTACAAAAGATGTTCAGTGGAGGCCAAGGAAAATAGGGTTTGTGCTAGGAACCAGGGTGAAGAGGAAGGTCCCAAGAGAATACGCTTGGAGGGGGAGGCTTCAACTTGA 2217 0.4456 MDAYSSGGEVIVKTRKPYTITKQREKWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALEKGVPIGQALDIDIPPPRPKRKPTNPYPRKTSTGSPALHNGIKDGKLTSVSPSHGKPLDLEKEPPPEESNGDERPVSVTENKDENCSGVFAIPQEAPCSSISSAKNRSISLSVPLRNSCILREFIPSVRVGTTRDETNKSSVTVELENQKCKIDDGKKLQQTKASKLEGSDASGVKLVQSQKTDYLNCALTKDRMQDNQNYQRHVPGHGIDGNQGTSTQNPPQDMLLRDSIFQPVGKVSGQPSIFTGSAASNTSESMYPPFTQVLCSQDHCHSFFHMFPTFSSLFVSALMQNPASHAAASFAATFWPHTNAEASADSPASSQGGFTTRQIGSPPSMEAIAATTVAAATAWWTAHGLLPLCAPLHSALSSPPASAVLVPSMNTGEAQGAEKDQKETTVENPPQQDQMPNGEYSEALQAQHSDSTSQAVCSSDSKSGDAKLTTSPDAAEHGKNDAMSEHPVSNKTNGRKLVDRSSCGSNTTSSSDIETDALEKNEKGKEESLTPDANHLTTDPSNRRSRSSGNLTDSWKEVSEEGRQAFQALFSREVLPQSFPPPHLEKDIQKDHKKEHHEQNTVEKYGDLDSNKYRSDLVGVKKNMPFVENTQEEEGPLTIGLGQGKLKACRTGFKPYKRCSVEAKENRVCARNQGEEEGPKRIRLEGEAST 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0216 738 MobiDBLite consensus disorder prediction 533 562 - -
Acco07g0216 738 MobiDBLite consensus disorder prediction 475 516 - -
Acco07g0216 738 MobiDBLite consensus disorder prediction 581 603 - -
Acco07g0216 738 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Acco07g0216 738 NCBIfam myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Acco07g0216 738 MobiDBLite consensus disorder prediction 84 159 - -
Acco07g0216 738 MobiDBLite consensus disorder prediction 389 409 - -
Acco07g0216 738 PANTHER SWI/SNF COMPLEX-RELATED 9 622 - -
Acco07g0216 738 MobiDBLite consensus disorder prediction 632 656 - -
Acco07g0216 738 FunFam protein REVEILLE 6 isoform X1 26 74 - -
Acco07g0216 738 Coils Coil 737 738 - -
Acco07g0216 738 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Acco07g0216 738 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Acco07g0216 738 MobiDBLite consensus disorder prediction 563 580 - -
Acco07g0216 738 MobiDBLite consensus disorder prediction 459 656 - -
Acco07g0216 738 MobiDBLite consensus disorder prediction 133 157 - -
Acco07g0216 738 CDD SANT 26 69 IPR001005 -
Acco07g0216 738 Gene3D - 26 73 - -
Acco07g0216 738 MobiDBLite consensus disorder prediction 718 738 - -
Acco07g0216 738 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Acco07g0216 738 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Acco07g0216 738 SMART sant 23 71 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0216 Acco-ChrAcco07 2374478 2379670 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco07g0216 Myb_DNA-binding 1.4e-13 CL0123