Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0205 ATGATGGAGAGGATTCAAGGACTCATCAATTCCTGTTTATTTAGTGAGCATTTGGAAGTAAGTTGTTTCGAGCAAGGCTTCGTCAACACAGAGGATGAGGAACAACTTTATATATCAAGCTTAGAGGATGAAAAGATGCCTTTTCTGCAGATGTTGCAGAGTGCGGAATCTCCACAACAGTTTTTCCCATTTTCAGGCGCAAATTTTCAAACACTTTTAAGGCTACAGAACCTGAAGAAACAACAACCATGGGAGGAAGAAAAAGCTCACATACCCAGATTGGAGACTCAAATCCAAGCTAAAGAACTTGAAAGCTGCGTCTCACATGACGTCTTCGAGATTCACTCGCCAGTGAAATCCGAAACCAACGAAGAATCTCATCTTCTTCCTCTTTCAGCCACAATGGTTCAGAAAGAAAACACCAATAATGAAGCTGAAAATTCTACCAGAGACCCCAGACGGAGAAAGCGAAAGAGAACAAGACCAGTCAAGAACAAAGAAGAAGTGGAGAACCAGAGAATGACCCACATTGCCGTGGAACGGAACCGGCGACGCCAGATGAACGACCATCTCAGTGTTCTGAAAACTCTCATGCCTCCTTCCTATATCCAAAGGGGTGACCAAGCGTCTATCATTGGAGGTGCAATTGATTTCGTAAAGGAATTGGAGCAACTACTTCAAACCCTCGAAGCACAAAAGAGGATTAGAAAGAACGAAGAGATTGGATGTTCTTACGGAGGAGAAACTGTGAAACCATCGTTACTGAGCTGCGAAGAACGAGAAGAAGAGGTGAATGAAGCAGAGATTATAGAGGTGATGGTGATTCAGACGCATGTGAAATTGAAGGTTCGATGCAGAAAAAAGCAGGGGCAATTGGTGAGAGCCATTGTTGGATTGGAAGAGCTTAGGCTTAGCGTTCTTCATCTGAACATAACCTCCTCGATGGAATCGGTACTCTACTGTTTCAATCTCAAGATAGAAGAAGAGTGTAAGCTAGGGTCGGCAAATGAGATAGCAGAAGCTGTGGGTCACATATTCAGAGCCATTGATAATTAA 1056 0.4328 MMERIQGLINSCLFSEHLEVSCFEQGFVNTEDEEQLYISSLEDEKMPFLQMLQSAESPQQFFPFSGANFQTLLRLQNLKKQQPWEEEKAHIPRLETQIQAKELESCVSHDVFEIHSPVKSETNEESHLLPLSATMVQKENTNNEAENSTRDPRRRKRKRTRPVKNKEEVENQRMTHIAVERNRRRQMNDHLSVLKTLMPPSYIQRGDQASIIGGAIDFVKELEQLLQTLEAQKRIRKNEEIGCSYGGETVKPSLLSCEEREEEVNEAEIIEVMVIQTHVKLKVRCRKKQGQLVRAIVGLEELRLSVLHLNITSSMESVLYCFNLKIEEECKLGSANEIAEAVGHIFRAIDN 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0205 351 MobiDBLite consensus disorder prediction 118 169 - -
Acco07g0205 351 CDD bHLH_AtFAMA_like 174 245 - -
Acco07g0205 351 SMART finulus 177 228 IPR011598 GO:0046983
Acco07g0205 351 Gene3D - 162 243 IPR036638 GO:0046983
Acco07g0205 351 PANTHER MAX DIMERIZATION, MAD 106 349 - -
Acco07g0205 351 MobiDBLite consensus disorder prediction 123 143 - -
Acco07g0205 351 Coils Coil 219 239 - -
Acco07g0205 351 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 171 222 IPR011598 GO:0046983
Acco07g0205 351 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 171 238 IPR036638 GO:0046983
Acco07g0205 351 Pfam Helix-loop-helix DNA-binding domain 172 223 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0205 Acco-ChrAcco07 2226120 2228701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0205 51 346 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G46810 42.486 9.10e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco07g0205 HLH 3.3e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g0205 07 2226120 2228701 Acco07g0205 07 2226120 2228701 ECH