Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0197 ATGGAGGTCGGGTTGGAGACCGAGGAGGATCAGAGCAAAAAGATTGTACGCTGGGAGAAGTTTTTGCCTCGGATGGCGCCTAGAGTATTACTTGTGGAAGCGGATGATTCTACTCGTCATATTATCGCGGCCCTTCTCCGGAAATGTAGTTACATAGTTGCTGCTGTTCCTGATGGATTAAAGGCATGGGAGACACTGAAGCGGAAAGCTTCTGAAATCGATCTCATATTAACAGAAGTGGAGTTGCCATCAATATCTGGATTTGCACTTCTTACTTTGATCATGGAACATGATATATGCAAGAACATTCCTGTCATAATGATGTCTACCCATGATTCAGTTAGTTTATCAGTGAAATGCATCTTGAAAGGTGCAGCTGATTTTCTCATTAAACCTGTTCGGAGGAATGAGCTGAGGAACTTGTGGCAGCATGTATGGAGAAGACATGAGAAAAGACTGGAAACTACTTCTGAAAACAAGGCTGCCAGCAATCATTCTAGTGGTTCTGTGGCTTCCACACAGAAAAATAATGGACGACCTGAGAAAGGGAGTGAGGCCCAAAGCACTTGTACATCGCCATTTTCGGAAGCTGAGAGTGCATACATGCAAAATATGCAGGATACATCCCACCTGAAGAGTTCTTCGAATTTGAGCGACATTGACAAGGTACAGAATGAAGAATCAACCATATTGGGTTTGGAAAAGCAATCAGTTGAGCTTCACAATGAAACTGGAGGTCACAACATACTTGTCACAGACAAGTCAGGGGCATTGTTATCACCAGCTGCAAAGAGTGACAAGAATTTTAAATCGACAGATTTTGGGCAGGATCAAGGACATGATTGTGCTGAAAAGGAGAATCAAGTTGAAGTTCTTAGAGCAGAGTCAAGCAGAGAAAATCATAACATGGATACAGAGATTCATGAATGCAACAATGAACTGTTAGAACCCTCTAGAGGAGCTATTGATTTGATTGCTACATTCAATAATCTACCAGTAAAGTATGATGAAAGCTGTAATCTCAGTGGTAGTGGCACAAAGAAGTTTGATTTTTATCCACGATTGGAGCTTTCTCTAAGACGTGATTTTCCTGGAAGCTCACCTAAACAAACAATTGATGAAAATCTGGCCTTGAACCATTCAAAGGCTTCTGCCTTTTCTTGGTATAGCGGGTGCAAATTTCCATCACCATCTGGAAGCTGTGCTAAAGCAGGTGGCCACACTGGGAATTCTCATGAAGCCAGTAAATTATCCATAAATACTGTTGAAACTTCCCGTCAATATGGTGGCACGAATCATAGTTCAGAGAATATGGCGACCCTTGCCATTGGTCAGTCCGGTCAAGTGGTAATACAATTGCCGAACAGCCAACTTGGACCATTTCCTGCTACTGTTGCTTCTGATAACAAGCCTACTAGATCCGAACACGTTTTTCCACCTCTGCTCCAAACACAATCTGATGTTCATTCCACATGGAATCCAAAACCTAACTTCCCAAAAGAGAGTTCTCCTTCTCCCATTCTCGCAAGTAACTCTTTCCAGTCCAATCCTGAGAGTCACAATTCTGAACAACGTTTTCACTGTTCTGATGATGACACCTATACTTCTCGTGATAAAACTGCAAATGAAAAAAACAATTTGGATCCTGCGAGGCAACATTCTTCTGCTGTTGATCAGAGCACAAGCAATGCCTCTTGCCATGACACTGCAAATCAGAACAGTAAGGATGCTAATAATACTAGTGCACATAAACCCGCATGCAAAATTGATGGAAATGCTTCTTCAGCTGCAGTAGTCGAGAGCAACACTGAAAATTACGGGGACAGTGGCTATCATAATAATGATGGATTTAGAGGGACAGATTCTCATTGTCCCAGCCACAGAGAAGCTGCTCTAACGAAGTTTCGGATGAAGCGGAAAGAGAGGTGCTATGAGAAAAAGGTCCGATATCTAAGCAGGAAAAGACTAGCAGAGAAGCGTCCGCGGATTAAAGGGCAGTTTGTACGCCAAGTACATAACAACAATCATCCTGTTGCTGATGTTGGTGGTTCCTGA 2055 0.4263 MEVGLETEEDQSKKIVRWEKFLPRMAPRVLLVEADDSTRHIIAALLRKCSYIVAAVPDGLKAWETLKRKASEIDLILTEVELPSISGFALLTLIMEHDICKNIPVIMMSTHDSVSLSVKCILKGAADFLIKPVRRNELRNLWQHVWRRHEKRLETTSENKAASNHSSGSVASTQKNNGRPEKGSEAQSTCTSPFSEAESAYMQNMQDTSHLKSSSNLSDIDKVQNEESTILGLEKQSVELHNETGGHNILVTDKSGALLSPAAKSDKNFKSTDFGQDQGHDCAEKENQVEVLRAESSRENHNMDTEIHECNNELLEPSRGAIDLIATFNNLPVKYDESCNLSGSGTKKFDFYPRLELSLRRDFPGSSPKQTIDENLALNHSKASAFSWYSGCKFPSPSGSCAKAGGHTGNSHEASKLSINTVETSRQYGGTNHSSENMATLAIGQSGQVVIQLPNSQLGPFPATVASDNKPTRSEHVFPPLLQTQSDVHSTWNPKPNFPKESSPSPILASNSFQSNPESHNSEQRFHCSDDDTYTSRDKTANEKNNLDPARQHSSAVDQSTSNASCHDTANQNSKDANNTSAHKPACKIDGNASSAAVVESNTENYGDSGYHNNDGFRGTDSHCPSHREAALTKFRMKRKERCYEKKVRYLSRKRLAEKRPRIKGQFVRQVHNNNHPVADVGGS 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0197 684 CDD psREC_PRR 29 132 - -
Acco07g0197 684 Coils Coil 282 302 - -
Acco07g0197 684 Gene3D - 25 231 - -
Acco07g0197 684 Pfam Response regulator receiver domain 29 140 IPR001789 GO:0000160
Acco07g0197 684 SUPERFAMILY CheY-like 21 156 IPR011006 -
Acco07g0197 684 MobiDBLite consensus disorder prediction 523 546 - -
Acco07g0197 684 MobiDBLite consensus disorder prediction 482 588 - -
Acco07g0197 684 MobiDBLite consensus disorder prediction 159 194 - -
Acco07g0197 684 MobiDBLite consensus disorder prediction 153 194 - -
Acco07g0197 684 SMART REC_2 27 142 IPR001789 GO:0000160
Acco07g0197 684 MobiDBLite consensus disorder prediction 482 522 - -
Acco07g0197 684 PANTHER TWO-COMPONENT RESPONSE REGULATOR 27 345 IPR045279 GO:0009736
Acco07g0197 684 MobiDBLite consensus disorder prediction 547 581 - -
Acco07g0197 684 ProSiteProfiles CCT domain profile. 628 670 IPR010402 GO:0005515
Acco07g0197 684 Pfam CCT motif 628 670 IPR010402 GO:0005515
Acco07g0197 684 ProSiteProfiles Response regulatory domain profile. 28 146 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0197 Acco-ChrAcco07 2139816 2144825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0197 627 677 Response Regulator Gene Family AT5G24470 80.392 1.29e-19 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Acco07g0197 Response_reg 6.8e-21 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g0197 07 2139816 2144825 Acco07g0197 07 2139816 2144825 ECH