Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0194 ATGGAAGCTATTCTCTGCCTCACTCCACTTTCCTTCTCAGCATCAAGAAACAAGCCTCAAATCGCAGCTTCAGCGAAACGGTTAGCTTCATGCTCATCGTTTCTTCCTTCTTCGGTTCATTCATTATCTCTGGGCGCTATCTTCTCTCCGCAGTCTTTCACTTCGGTCCCTTCGTTTTACTCTTCTTTATCGAAGGGGCGAAGCAGGAAAGCTAGGGTTCTGGCGGTGGTGGATGAAGAAACGGCGCTTGCTGAAGACATTACCGGAGAAAAATATGTGAACGCAGAAAACGATGACGTTTCCCATGAGAGAGAACCAAGTAAAGTGGGAAGACCGTGTGAATTGTATGTTTGTAATCTTCCAAGGAGCTGTGATTCAACTCAGCTTCACGATATGCTCAAGCCTTATGGAACTGTCCTATCTGCCGAGGTTGATCGTAATGATGACACCGGTGAAAGTAGAGGATGTGGTTATGTCACAATGGGATCAATTAGCTCAGCAAAAAAAGCAATTGCTGCATTGGATAGATCGGATATTGGTGGGCGTGAAATGCGGGTTCGATTTTCAGCTGAGATGAATCCTGGAAGGAGCAATGTTGAGGCGATGAACTTGTCACCCCAGAAAGTATTTTTCCATGAAACTCCGCACAAGTTATATATTGGCAATCTTGCTAGGTTTGTTAAACCTGGAGACTTATGGAATCATTTTCGAAGATTTGGCACTGTTGTTAGTGCAAGAATACTGCATGATCATAAAGTAGGGAGTAGCCGTGTTTATGCATTTATCTCCTTTCTTTCTCAGTCAGAACGTGATGCTGCATTGTCTCTTAATGGAACCGAACTCTGTGGCCGTGTACTAGTAGTGAGAGAAGGTATAGAGAGGACTGTGCCATAG 894 0.4441 MEAILCLTPLSFSASRNKPQIAASAKRLASCSSFLPSSVHSLSLGAIFSPQSFTSVPSFYSSLSKGRSRKARVLAVVDEETALAEDITGEKYVNAENDDVSHEREPSKVGRPCELYVCNLPRSCDSTQLHDMLKPYGTVLSAEVDRNDDTGESRGCGYVTMGSISSAKKAIAALDRSDIGGREMRVRFSAEMNPGRSNVEAMNLSPQKVFFHETPHKLYIGNLARFVKPGDLWNHFRRFGTVVSARILHDHKVGSSRVYAFISFLSQSERDAALSLNGTELCGRVLVVREGIERTVP 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0194 297 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 113 191 IPR000504 GO:0003723
Acco07g0194 297 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 216 293 IPR000504 GO:0003723
Acco07g0194 297 SUPERFAMILY RNA-binding domain, RBD 213 293 IPR035979 GO:0003676
Acco07g0194 297 SMART rrm1_1 217 289 IPR000504 GO:0003723
Acco07g0194 297 SMART rrm1_1 114 187 IPR000504 GO:0003723
Acco07g0194 297 PANTHER OS02G0815200 PROTEIN 40 289 - -
Acco07g0194 297 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 218 286 IPR000504 GO:0003723
Acco07g0194 297 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 115 185 IPR000504 GO:0003723
Acco07g0194 297 Gene3D - 61 197 IPR012677 -
Acco07g0194 297 Gene3D - 198 289 IPR012677 -
Acco07g0194 297 SUPERFAMILY RNA-binding domain, RBD 104 195 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0194 Acco-ChrAcco07 2120758 2122214 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0194 113 288 Eukaryotic Initiation Factors Gene Family AT2G23350 28.814 2.05e-12 65.5