Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0190 ATGGATTCTCATTCAAGTAATCACATTGGCAGCCGAGCGAACTGCGGGGAACAAATCTACTCTCATCTCAGTTGCCTGAGCTTAAAAATGTCGATTGGAGAGACTGCTTGCACTTACGCGACTCTGATCCTCCATGATGATGGCATTCCGATAACTGCTGAGAAGATATCGACCATCGTGAAGGCGGCAAATGTTTCCGTTGAATCTTATTGGCCTAGCTTGTTCGCTAAACTTGCTGAGAAGCGAAACATTGAGGATTTGATAGTGAATGCTGGAGGAGGCGGGGCTTCAGTTGCTGTTGCGGCAGTCCCAGCTGCAGGCGGCGGCGGTGGCGCAGCTGCTCCTCCTCCTGCTGAGGAGAAGAAGGAAGAGCCCCAAGAAGAAAGCGATGGCGACATGGGATTCAGCTTGTTTGATTAG 420 0.5071 MDSHSSNHIGSRANCGEQIYSHLSCLSLKMSIGETACTYATLILHDDGIPITAEKISTIVKAANVSVESYWPSLFAKLAEKRNIEDLIVNAGGGGASVAVAAVPAAGGGGGAAAPPPAEEKKEEPQEESDGDMGFSLFD 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0190 139 Gene3D - 30 92 IPR038716 -
Acco07g0190 139 FunFam 60S acidic ribosomal protein P1 30 92 - -
Acco07g0190 139 Pfam 60s Acidic ribosomal protein 51 138 - -
Acco07g0190 139 MobiDBLite consensus disorder prediction 106 139 - -
Acco07g0190 139 CDD Ribosomal_P1 34 90 - -
Acco07g0190 139 Hamap 50S ribosomal protein L12 [rpl12]. 35 139 IPR027534 GO:0003735|GO:0005840|GO:0006414
Acco07g0190 139 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 30 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0190 Acco-ChrAcco07 2095688 2096885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0190 30 139 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 60.177 4.53e-39 126