Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0189 ATGTTGATAATGTCGCAACAAAGGCAATTCCAAATGGTGGGAGGGCAATACAACATCGACACAACATTGACAAAAATCTTCGTGGGAGGGCTTGCTTGGGAGACTCAAAGGGACACTATGAGGAGTTATTTTGAGCAGTTCGGAGAGATTCTTGAAGCTGTTGTCATCACAGAAAAGAACACAGGGAGATCCAAGGGTTATGGCTTTGTCACATTCAAGGATCCAGAAGCAGCCATGCGAGCATGTCAGAACCCTAATCCTGTTATTGATGGAAGAAGAGCAAACTGCAATCTTGCTTCTCTTGGTGCAAACAAGAATCGGCCTTCTCCAACTCCTCATCTTGGTACAAGAAGGTTCAGAGCAGCACCTGGATTGGTGGGCTTGCAGCCAGCATTTCATGGCTCTTCCTCCACAATTTTCCGTCAACCCACTGGGCAATACACGTTTCCATATTCACCTTACAGTTACAGATACTCTGGATATTCACAAGACTCCATCTATCCCTTGAACTATTACAGTGTGTATGGAGGTCAACAATTTTCACCATACTATTCATCATCCAGTGGGCCATCTGGGCTAGCAGGGTTAATGAACAGTGACATTTACCCATTCTATACTCAATTGGCAGAGAGTGGCCAGGCTCATCATGGTTTTGGAGTTCATCACTATCCTCAAATGGTACCCTTGCCATTTCTTCATCCAGTCCCCTCATTTCCTTCTTCAATGCCAATGCCAACGCCAACTACTCCTAGCGAAGTGTCATCAGCATCAATAGCAGCAGGGGAACAGACAGAATCAGTAGGAGCAGGTGCTTCACAAGCCTCTGCAGTAAAAGCTTCAGAACAAAACCCTTCATCAACTTAA 864 0.4525 MLIMSQQRQFQMVGGQYNIDTTLTKIFVGGLAWETQRDTMRSYFEQFGEILEAVVITEKNTGRSKGYGFVTFKDPEAAMRACQNPNPVIDGRRANCNLASLGANKNRPSPTPHLGTRRFRAAPGLVGLQPAFHGSSSTIFRQPTGQYTFPYSPYSYRYSGYSQDSIYPLNYYSVYGGQQFSPYYSSSSGPSGLAGLMNSDIYPFYTQLAESGQAHHGFGVHHYPQMVPLPFLHPVPSFPSSMPMPTPTTPSEVSSASIAAGEQTESVGAGASQASAVKASEQNPSST 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0189 287 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 24 101 IPR000504 GO:0003723
Acco07g0189 287 PANTHER BOULE-RELATED 18 255 - -
Acco07g0189 287 MobiDBLite consensus disorder prediction 240 287 - -
Acco07g0189 287 SMART rrm1_1 25 97 IPR000504 GO:0003723
Acco07g0189 287 MobiDBLite consensus disorder prediction 247 287 - -
Acco07g0189 287 Gene3D - 4 110 IPR012677 -
Acco07g0189 287 CDD RRM_RBM24_RBM38_like 24 99 - -
Acco07g0189 287 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 26 84 IPR000504 GO:0003723
Acco07g0189 287 SUPERFAMILY RNA-binding domain, RBD 24 111 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0189 Acco-ChrAcco07 2086006 2087606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0189 20 198 C2H2 Transcription Factor Family AT2G19380 30.570 8.86e-17 78.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g0189 07 2086006 2087606 Acco07g0189 07 2086006 2087606 ECH