Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0188 ATGCCGGAAAACATGAGCATCTCTGTGAATGTGAATGGACAATCTCAGGTCCCTCCTGGTTTCAGATTCCACCCAACCGAAGAAGAGCTTTTGCAGTACTACTTGAGGAAGAAGGTCTCCTACGAGAAGATTGACCTCGACGTCATTCGTGACGTCGATCTCAACAAGCTCGAGCCTTGGGATATTCAAGAGAAGTGTAAGATAGGAACCACACCGCAAAACGACTGGTACTTCTTCAGCCACAAGGACAAAAAGTACCCCACCGGAACGCGAACCAACCGAGCCACGGCGGCCGGATTCTGGAAAGCCACCGGCCGGGATAAGGTGATATACAGCAACGGCAAGAGGATCGGAATGAGGAAGACTCTTGTCTTCTACAAAGGCCGTGCCCCTCATGGCCAGAAATCTGATTGGATCATGCACGAATATCGCCTAGACGATAACATCAGCGACACCAACATCGTGTCGAATGTGATGGGAGATGGAGCACAGGAAGAAGGATGGGTGGTATGCAGAATATTCAAGAAGAAGAATCATCTGAAAACTGCCCTAGATTGCCCCTTAACTTCGTCCATTATTACCGGAGAAAGTACCAGAAGAAGCCACAACATGTTCGACGACGATGAAGGCGCTTTAGAGCAGATACTTCAGCAGATGGGAAGAAGCTGCAAAGAAGAGAACGAAGTGAATTACAGCAACAACAATAATGGAAGATTCTCTCTATCATCAAGCTTCAACAATAATAATGGTGGTGATCATAGTAGTTCTATCAACTATAATGACAGGTTCTTGAAGCTCCCAAACTTAGAAAGTCCAAAATCCACAAGCTTGGAGAATAATCACAATAATATTGACACCAACAATAATGTGTACCACCCTATGATCCCAGAGATGGAAGGATCCTTCACGACCGTTCATCACATGGATGGATCTAACGGTGGAAGGCTCGCCAACTGGGCGGCTCTGGATCGTCTTGTTGCTTCTCAGCTCAATGGCCAGACTGAGTCTTCAAGGCAACTAGCTTGCTTCGGTACTGACCCCACGAGCAGCGCCATGATGGTGTACTGTACTAACGACGTCGTTCAGGATCTGCAAATGCCCACCCTACGATCCTCCTCATCGTCCACGTCAACGTCCACGCACAGAGCTGCGTTCGTGAGTCCTCAAGCACAAGATTATAACAGCAGCGAGATTGACCTATGGACCTTTGCCAGATCAGCATCGTCGTTGTTGTCGTCGTCCTCAGAGCCACTGTGCCATGTTTCGAACACGTTTATGATGATGATGGATCAATAA 1296 0.4769 MPENMSISVNVNGQSQVPPGFRFHPTEEELLQYYLRKKVSYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYSNGKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNISDTNIVSNVMGDGAQEEGWVVCRIFKKKNHLKTALDCPLTSSIITGESTRRSHNMFDDDEGALEQILQQMGRSCKEENEVNYSNNNNGRFSLSSSFNNNNGGDHSSSINYNDRFLKLPNLESPKSTSLENNHNNIDTNNNVYHPMIPEMEGSFTTVHHMDGSNGGRLANWAALDRLVASQLNGQTESSRQLACFGTDPTSSAMMVYCTNDVVQDLQMPTLRSSSSSTSTSTHRAAFVSPQAQDYNSSEIDLWTFARSASSLLSSSSEPLCHVSNTFMMMMDQ 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0188 431 FunFam NAC domain-containing protein 26 180 - -
Acco07g0188 431 ProSiteProfiles NAC domain profile. 17 176 IPR003441 GO:0003677|GO:0006355
Acco07g0188 431 SUPERFAMILY NAC domain 12 176 IPR036093 GO:0003677|GO:0006355
Acco07g0188 431 Pfam No apical meristem (NAM) protein 18 145 IPR003441 GO:0003677|GO:0006355
Acco07g0188 431 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 265 - -
Acco07g0188 431 Gene3D NAC domain 26 181 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0188 Acco-ChrAcco07 2056390 2058587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0188 6 423 NAC Transcription Factor Family AT2G46770 53.505 3.98e-139 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco07g0188 NAM 4.1e-36 No_clan