Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0186 ATGGGGAAGAAAAAAGGAGGTAGCTCATGGTTGAGTGCCGTCAAAAGAGCCTTCAGATCTCCAACCAAAGACCAAATCGACGAAGACAAGAAAAGAGAAAAACGAAGATGGATCTTCAGAAAACCGGTAATAAACCACGAATCACCGAGTTCCCAACGAACCTCAGCAGAGGAGAAGCCTGATGCGGCCGAGGCAGCCACAGATCAAAAGCACGCGCTGGCTGTGGCGGTTGCCGCCGCTGAGGTGGCCATGGCCACAGCTCAGGCGGCTGTGGAAGTGGCTAAACTTACCAGACCACCTAATCATACCAAGGAGCACTATGCAGCTATTGTGATTCAAACTGCTTTCAGAGGATACTTGGCAAGAAGGGCTCTTCGAGCTTTGAAGGGGCTGGTAAAATTACAAGCATTAGTAAGGGGTCACAATGTTCGGAAGCAAGCGAAGATGACACTTCGGTGCATGCAGGCTCTGGTCAGAGTTCAAGCTCGGGTGGTTGATCAGCGAGTGAGGCTGTCACATGATGGAAGCAGTAGAAAATCAACGTTTAGTGGCACAAATAGTCTCTTGGAATCGCGTTATCTTCAGGACATTTCAGATAGAAGATCAATGTCAAGAGGAGGAAGCAGTATTGCAAATGATTGGGATGAAAGGCCACACACAGTTGAAGAAATTAGGCAGAGGAAGGAGGATGCTTTGAAGCGAGACAAGTCCTTGTCTCGAGCTTTCTCTCAACAGGTCTGGAGAACCGGAAGACGGCCGTCAATTGGGAATGAAGAGGAGCTGGAGGAGAGGCCGGCATGGTTGGAACGGTGGATGGCAGCGAAGCCGTGGGAGATGAGGGGAAGATCATCGTTTGATCATCAAAGAGACACTATCAAGACAGTAGAAATGGACACATCTCGTCCTTACTCATCATATTTAGGATCAAACTACAGAAAATCACACCCAAATTACCAATATAACCCACACCAACATCAGCCTCAAAGACACTCTGTAGCATCTCTATTCCACCAAAACGCGTCGTCCTCGTCATCTCTTCACCATTCCCCTGCAACCCCGTCTCCTGTGAAATCCCGTCCAATTCAAGTCCGGTCGGCGAGCCCTCGCTGTGCCCGGGAAGATAGAAGCTTCCATAGCACATCTCGAACACCAAGCTTGAGGTCCAACTATCATTACACAGGAAGCTTGTACCAATGTGGAATAGGTGGTGGAAGCAGCAAAAATAGTGGCGCTTCACTGCCTAATTACATGGCAGCGACTGAGTCTGCCAAGGCGAGGATCCGGTCTCTGAGCGCGCCAAGGCAGAGGCCTTCAATATCAGAGAGAGACAGAGTTGGATCAGCAAAGAAGAGGCTTTCTTTCCCTGCTCATCCTCCTGGAGATGCCTATGCTCATGGCGGTTATAGCAGTTATGGTAGTTATGGACATAGTCTGAGGAGTCCAAGCTTCAAGAGTGTGAGTGGGTCACATTATGGGATGGATCAAGTTTCCATATATTCTTCTTGCTGCACAGAGAGCCCTGCTACTGCTGCTGACATGTCTCCTTCAGCTGCTGATCTTAGAAGGTAG 1569 0.492 MGKKKGGSSWLSAVKRAFRSPTKDQIDEDKKREKRRWIFRKPVINHESPSSQRTSAEEKPDAAEAATDQKHALAVAVAAAEVAMATAQAAVEVAKLTRPPNHTKEHYAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVVDQRVRLSHDGSSRKSTFSGTNSLLESRYLQDISDRRSMSRGGSSIANDWDERPHTVEEIRQRKEDALKRDKSLSRAFSQQVWRTGRRPSIGNEEELEERPAWLERWMAAKPWEMRGRSSFDHQRDTIKTVEMDTSRPYSSYLGSNYRKSHPNYQYNPHQHQPQRHSVASLFHQNASSSSSLHHSPATPSPVKSRPIQVRSASPRCAREDRSFHSTSRTPSLRSNYHYTGSLYQCGIGGGSSKNSGASLPNYMAATESAKARIRSLSAPRQRPSISERDRVGSAKKRLSFPAHPPGDAYAHGGYSSYGSYGHSLRSPSFKSVSGSHYGMDQVSIYSSCCTESPATAADMSPSAADLRR 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0186 522 MobiDBLite consensus disorder prediction 427 458 - -
Acco07g0186 522 ProSiteProfiles IQ motif profile. 105 133 IPR000048 GO:0005515
Acco07g0186 522 MobiDBLite consensus disorder prediction 291 389 - -
Acco07g0186 522 ProSiteProfiles IQ motif profile. 129 156 IPR000048 GO:0005515
Acco07g0186 522 MobiDBLite consensus disorder prediction 297 361 - -
Acco07g0186 522 Gene3D - 102 158 - -
Acco07g0186 522 FunFam IQ-domain 11 104 155 - -
Acco07g0186 522 MobiDBLite consensus disorder prediction 20 35 - -
Acco07g0186 522 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 149 IPR027417 -
Acco07g0186 522 Pfam IQ calmodulin-binding motif 108 126 IPR000048 GO:0005515
Acco07g0186 522 Pfam IQ calmodulin-binding motif 132 148 IPR000048 GO:0005515
Acco07g0186 522 SMART iq_5 127 148 IPR000048 GO:0005515
Acco07g0186 522 SMART iq_5 104 126 IPR000048 GO:0005515
Acco07g0186 522 Pfam Protein of unknown function (DUF4005) 367 480 IPR025064 -
Acco07g0186 522 MobiDBLite consensus disorder prediction 52 66 - -
Acco07g0186 522 PANTHER IQ-DOMAIN 5-RELATED 1 456 - -
Acco07g0186 522 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0186 Acco-ChrAcco07 2025789 2028550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0186 10 522 IQD Protein Family AT4G00820 52.708 2.66e-158 459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g0186 07 2025789 2028550 Acco07g0186 07 2025789 2028550 ECH