Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0179 ATGAATGCAGCGAAATCTCGTACCCGCGTCGGAAAATACGAACTGGGTAAAACCATTGGCGAGGGTAGCTTCGCCAAGGTGAAGTTTGCGAGAAACGTTGAGACAGGGCAGCACGTTGCCATCAAAATCCTCGACCGTAACCATGTTCTTAGACACAAGATGGTGGAACAGCTGAAGAGAGAAATTTCCACCATGAAGCTGATCAAGCATCCGAATGTTGTCAATATATTTGAGGTGATGGCAAGTAAAACAAAGATTTACATTGTCCTGGAGTTTGTTAGTGGGGGAGAACTATTTGACAAAATAGCTAATGATGGGAAGCTTAAGGAGAATGAAGCAAGGCAATATTTCCAACAACTTATTAATGCTGTTGATTACTGCCATAGTAGAGGTGTCTTTCACAGAGACTTGAAGCCTGAGAATCTTCTTCTGGACTCAAATGGTATTCTTAAAGTTTCAGATTTTGGACTGAGTACATACTCGCAGCAAGATGATGCACTGCTACGCACTGCCTGTGGAACCCCCAATTATGTTGCTCCTGAGGTGCTTAATGCTAATACTAAAGGCTATGATGGTTCAGCAGCTGATATTTGGTCATGCGGAGTCATTCTCTTTGTTCTGATGGCTGGATACTTACCTTTTGATGAACCAAGTCAAATGGTTTTGTATAAAAAAATTAGCAAGGCTGAATTCTCATACCCATCACGGTTTCCACCAGATGCAAAGAAACTGCTGTGTCGTATTCTTGATCCAAACCCTCTCACAAGGATAAAAATTTCGGAAATCTTGGAAGATAAATGGTTCAAGGAAGGATACAAACCACCATGTTTTGAAGAGGAAGAGGGTATAAATGTAGATGATGTAGCTGCGGCCTTCAATGATTCCAAGGAAAACCTTGTGACAGAGAGGAAAGAAAAACCTGTCTCCATGAATGCTTTTGAGCTCATTTCGAGGTCAGAGAGTTTCAATCTTGACAGTTTGTTTGAGAAAGGGATGGGCATTGTGAAGCGAGAAACAAGATTTACTTCTCAGCGCCCAGCTCATGAAATTATTTCTAAAATTGAGGAAGCTGCCAAACCACTGGGATTTAATGTTCACCGGCGTAACTACAAGATGAAGCTCCAAGGCGACAAGAGTGGAAGGAAGGGACACCTCTCTGTGGCTACTGAGGTTTTTGAAGTGGCTCCCTCATTGCACATGGTGGAGTTGCGGAAGACTGGGGGTGACACACTAGAGTTTCACAAGTTCTACAAGAAGTTTTCATCAGGTTTGCAAGATGTAGTATGGCACCCTGAAGGAAAAAACGAAGAAAAACTTGAACAATCAAGGTAG 1332 0.4249 MNAAKSRTRVGKYELGKTIGEGSFAKVKFARNVETGQHVAIKILDRNHVLRHKMVEQLKREISTMKLIKHPNVVNIFEVMASKTKIYIVLEFVSGGELFDKIANDGKLKENEARQYFQQLINAVDYCHSRGVFHRDLKPENLLLDSNGILKVSDFGLSTYSQQDDALLRTACGTPNYVAPEVLNANTKGYDGSAADIWSCGVILFVLMAGYLPFDEPSQMVLYKKISKAEFSYPSRFPPDAKKLLCRILDPNPLTRIKISEILEDKWFKEGYKPPCFEEEEGINVDDVAAAFNDSKENLVTERKEKPVSMNAFELISRSESFNLDSLFEKGMGIVKRETRFTSQRPAHEIISKIEEAAKPLGFNVHRRNYKMKLQGDKSGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHKFYKKFSSGLQDVVWHPEGKNEEKLEQSR 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0179 443 FunFam Non-specific serine/threonine protein kinase 304 430 - -
Acco07g0179 443 ProSiteProfiles Protein kinase domain profile. 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0179 443 Gene3D Phosphorylase Kinase; domain 1 2 92 - -
Acco07g0179 443 FunFam Non-specific serine/threonine protein kinase 6 308 - -
Acco07g0179 443 FunFam Non-specific serine/threonine protein kinase 4 92 - -
Acco07g0179 443 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Acco07g0179 443 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 9 415 - -
Acco07g0179 443 CDD CIPK_C 311 424 - -
Acco07g0179 443 Gene3D Transferase(Phosphotransferase) domain 1 93 293 - -
Acco07g0179 443 Pfam NAF domain 307 366 IPR004041 GO:0007165
Acco07g0179 443 SUPERFAMILY Protein kinase-like (PK-like) 10 280 IPR011009 -
Acco07g0179 443 Pfam Protein kinase domain 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0179 443 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Acco07g0179 443 SMART serkin_6 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g0179 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Acco07g0179 443 Gene3D Kinase associated domain 1, KA1 304 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0179 Acco-ChrAcco07 1967906 1972865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0179 6 438 CBL-interacting serine-threonine protein kinases AT1G01140 74.318 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Acco07g0179 Pkinase 2.5e-72 CL0016