Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0174 ATGGACGACCTTCTCCTCTACCCTTCCTCTCCTCCCTCCCTCCTCTCCTTTTCTCACTCTCCACCTCCGTCCTCCTCTCCTTCTCAGAACAAGCTTCAATCCTTAATTCAATCCCAGCCCCACTCTTGGCTCTATGCCATTTTCTGGCAAACCTCCCACGACGACCGCTCCCGCCTCCGCCTCTCCTGGGCCCACGGTCACTTCCACGGCTCAGATCATCATCGTCCCCGCCATAGCAGTAACAACAACTTATTCAAAAGTCTTGAATCTCTCGTCGATGACAATCTCAACGATGCCGAGTGGTTCTATGTCATGTCCTTGACTCGCACTTTTCCTCTCACTCCTGATTCCTCCGCCACCTCCCTCCCCGCCAGGGCCTTCTCCTCCGGTTCTCCCCTCTGGCTCAATATCAGCGACCAAGACCTTCAATTTCACGGTTGCGATCGTGCCAAAGAAGCTTCTCTGCATGGGATTCGAACCCTCATCTGTCTTCCCGCCTCCCACGGGGTTATCGAAATGGGTTCCGCTGAAATCATTCCCAAGAACTCCATTCTCATCCAACAAGTTAAATCTCTGTACGGCCCCTCCGATCTGATCACCCCACTCCTCACACCTTCTGATAATCAGCCCGAACAAGTTGATCTCTTGGACGTCGATGAGACCATTTCTTTTGCCGACATTGGCATTATCAACGATCCGCCCGAAGTAGAAGATGAAAAGCCACTGGTCAATTCATCATGTGGTAATAAGAAATCCCGAAAGAAAGGCCCTCGTCTCCCGCTCAGATCTTACGTGGACTCAGAGCATTCTCATTCGGATTCCGACGAGCCTATCATAGAGAAAACGCCGCTCAAGAAGAGAGGAAGAAAGCCCGGGCTGGGCCGGGAGACGCCGATCAACCACGTGGAGGCTGAGCGGCAGCGCCGCGAGAAGCTGAACCACCGTTTCTACGCTCTGCGCGCCGCGGTCCCGCATGTGACGAGGATGGATAAGGCTTCGCTGTTATCGGACGCTGTCTCTTACATCAACGAGCTCAAAGCCAAGATCGAGAAACTTGAGTCGCAGGTAAAAAGGGAATCCACTGGTATGAACAGTGGGAGGAAGGTGAAGCTGGAAATGGCGGACACGATGGAGTCGACGGTGGAGCAGACCAGGCACAGCGGGCGGTACTTGAGCCAGGGCCTGGGCCTGGGCGGGGTGGAGGTGGACGTCAGGATCATGGGCCCGGACGCAATTATCAGAGTTCAGTCGGAGAACAGGAACCACCCCGGAGCGCGGCTGATGGACGCGCTGCGAGACTTAGAGCTGAGAGTACACCAAGCGAGCATGTCATCTGTCCACGACGTCATGCTTCAAGACGTCGTCGTTAAGATCCCTCAAGGCCTGAGAAGCGACGAGGCCATCATTAAATCCGCTATTCTCAGGAGACTAGACCAGTAG 1440 0.5458 MDDLLLYPSSPPSLLSFSHSPPPSSSPSQNKLQSLIQSQPHSWLYAIFWQTSHDDRSRLRLSWAHGHFHGSDHHRPRHSSNNNLFKSLESLVDDNLNDAEWFYVMSLTRTFPLTPDSSATSLPARAFSSGSPLWLNISDQDLQFHGCDRAKEASLHGIRTLICLPASHGVIEMGSAEIIPKNSILIQQVKSLYGPSDLITPLLTPSDNQPEQVDLLDVDETISFADIGIINDPPEVEDEKPLVNSSCGNKKSRKKGPRLPLRSYVDSEHSHSDSDEPIIEKTPLKKRGRKPGLGRETPINHVEAERQRREKLNHRFYALRAAVPHVTRMDKASLLSDAVSYINELKAKIEKLESQVKRESTGMNSGRKVKLEMADTMESTVEQTRHSGRYLSQGLGLGGVEVDVRIMGPDAIIRVQSENRNHPGARLMDALRDLELRVHQASMSSVHDVMLQDVVVKIPQGLRSDEAIIKSAILRRLDQ 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0174 479 MobiDBLite consensus disorder prediction 1 33 - -
Acco07g0174 479 Gene3D - 295 370 IPR036638 GO:0046983
Acco07g0174 479 Coils Coil 335 362 - -
Acco07g0174 479 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 29 192 IPR025610 -
Acco07g0174 479 SMART finulus 302 351 IPR011598 GO:0046983
Acco07g0174 479 MobiDBLite consensus disorder prediction 259 296 - -
Acco07g0174 479 MobiDBLite consensus disorder prediction 233 296 - -
Acco07g0174 479 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 297 363 IPR036638 GO:0046983
Acco07g0174 479 MobiDBLite consensus disorder prediction 11 33 - -
Acco07g0174 479 Pfam Helix-loop-helix DNA-binding domain 300 345 IPR011598 GO:0046983
Acco07g0174 479 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 296 345 IPR011598 GO:0046983
Acco07g0174 479 PANTHER MYC 22 476 IPR045084 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0174 Acco-ChrAcco07 1922390 1923829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0174 29 458 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G17880 33.781 2.65e-84 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco07g0174 bHLH-MYC_N 1.1e-37 CL0161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g0174 07 1922390 1923829 Acco07g0174 07 1922390 1923829 ECH