Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0170 ATGTTAGATCACCACCACCACCACCATGCTGCCATGGAATATTCTCATTTAGCAGAAGCAGAAGCTTATAGCAGCACAGTTCCATCATTAGGAGGAGTCACAACAAGGAAGAGGAAGGGCAACAAAATTCAGAGAAGGTTCAGTGATGATCAGATCAGATCTCTGGAATCCATGTTCGAGACAGAGTCAAGGCTTGAGCCGAGGAAGAAGGTTCAGCTTGCAAGAGAGCTTGGGTTGCAGCCAAGACAGGTTGCTATCTGGTTCCAGAACAAAAGGGCAAGATGGAAGTCAAAGCAGATTGAAACAGACTATAGCATACTTAGAGCTAATTACACAAACTTGGCCTCAAGGTTCGAAGCTCTGAAGAAGGAGAAGGAAGCATTGCTAATTCAGTTGCAGAAGCTGAATGATTTAATACAGAAGCCAAACGAGGAAGCTCGTCAGGGGTATAATACACCAGTCAAACCAGCAAACAGCATGGATAGTGTGTCAGAAAATGGGGACAACATTAAAGTGAAGGCTGAGGAAAATCCAAGCTCAACAACAATGGAGAGATCAGAGCAGATGGTGGGTGTTCTGTCAGATGATGACAGCAGTATAAAAGCAGAATACTTTGGGCTTGAAGATGAACCTAATACTCTTCTGAATTTCGCGGAGCAAGCAGATGATTCCCTCAATTTTGATTCTGGTGAACTCTTAGACCAGTCTGGTGCTGGTTACCAGTGGTGGGACTTTTGGTCCTGA 744 0.4449 MLDHHHHHHAAMEYSHLAEAEAYSSTVPSLGGVTTRKRKGNKIQRRFSDDQIRSLESMFETESRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQIETDYSILRANYTNLASRFEALKKEKEALLIQLQKLNDLIQKPNEEARQGYNTPVKPANSMDSVSENGDNIKVKAEENPSSTTMERSEQMVGVLSDDDSSIKAEYFGLEDEPNTLLNFAEQADDSLNFDSGELLDQSGAGYQWWDFWS 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0170 247 ProSiteProfiles 'Homeobox' domain profile. 38 98 IPR001356 GO:0003677
Acco07g0170 247 SUPERFAMILY Homeodomain-like 24 99 IPR009057 -
Acco07g0170 247 CDD homeodomain 42 99 IPR001356 GO:0003677
Acco07g0170 247 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 41 183 IPR045224 GO:0003700
Acco07g0170 247 Gene3D - 33 104 - -
Acco07g0170 247 FunFam Homeobox-leucine zipper protein ATHB-7 25 98 - -
Acco07g0170 247 Coils Coil 111 138 - -
Acco07g0170 247 MobiDBLite consensus disorder prediction 145 166 - -
Acco07g0170 247 MobiDBLite consensus disorder prediction 152 166 - -
Acco07g0170 247 PRINTS Lambda-repressor HTH signature 78 94 IPR000047 GO:0003677
Acco07g0170 247 PRINTS Lambda-repressor HTH signature 69 78 IPR000047 GO:0003677
Acco07g0170 247 Pfam Homeobox associated leucine zipper 98 139 IPR003106 GO:0006355|GO:0043565
Acco07g0170 247 ProSitePatterns 'Homeobox' domain signature. 73 96 IPR017970 GO:0000981|GO:0006355
Acco07g0170 247 SMART HOX_1 41 102 IPR001356 GO:0003677
Acco07g0170 247 Pfam Homeodomain 45 96 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0170 Acco-ChrAcco07 1831343 1832278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0170 22 247 Homeobox Transcription Factor Family AT2G46680 51.406 6.40e-65 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Acco07g0170 Homeodomain 1.6e-16 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g0170 07 1831343 1832278 Acco07g0170 07 1831343 1832278 ECH