Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0155 ATGGAAGGAATGCATAATAATCAAAACTCAGCGACAAAACCACCGGCAATGGAGGAGAAGAAGGCAAGGCCACAAGAACAATTGAACTGTCCAAGGTGCAATTCAACCAACACCAAGTTCTGCTACTACAACAACTATAGCCTCACACAGCCCAGATACTTCTGCAAGACTTGTAGAAGGTACTGGACAGAAGGTGGGTCCCTCAGAAACATCCCAGTTGGAGGAGGTTCTAGAAAGAACAAGAACAAGATCATCACTTCCTTCTCAGCTTCCTCTTCTTCTTCTTCTTCATCAACCTCATCATCTTCAAAGCTTCCTGATCTAAACCCACCATTATTACCAAGTCTCTCAGGGTTTAAAGATCCAAGTTTGAATCTTTCTAGAAGCTTCCCAATTTCCAACCAGCAAAACTCTAAGATCCATGGAGGCCAAGATCTTAATCTGGCTTTTCCAACTTCTTCTTCTCTTTCAGCTCCTAGGGTTTTGAATAGTAATAATAATATTCCTTATGTTCCTTCATTCATGATGATGCCAAATACCTCGTATGGTGGTAATCTTAATAATTACCCATCTGGGTTAATTCCCATGCAAGAGGAAACTAAACCTAGCCATAATAATATGGGATTTTCTGTGGATGGGCTTGGAAACAGATCGTACGGAGTACAAGAGAATGATCATAACAATGGAGGGAGGGTTTTGCTTCCTTTTGGAGGAGTCAAGCAGATTCCAGGTGGTGGTGATGAAGTAGTGGTGCAAAATAATAAAGAACAAGGGAATTCAAGCGGGTTTTGGTCTGGAATGATTGGTGAAGGATCATGGTAA 822 0.4148 MEGMHNNQNSATKPPAMEEKKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKNKIITSFSASSSSSSSSTSSSSKLPDLNPPLLPSLSGFKDPSLNLSRSFPISNQQNSKIHGGQDLNLAFPTSSSLSAPRVLNSNNNIPYVPSFMMMPNTSYGGNLNNYPSGLIPMQEETKPSHNNMGFSVDGLGNRSYGVQENDHNNGGRVLLPFGGVKQIPGGGDEVVVQNNKEQGNSSGFWSGMIGEGSW 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0155 273 MobiDBLite consensus disorder prediction 88 116 - -
Acco07g0155 273 ProSiteProfiles Zinc finger Dof-type profile. 28 82 IPR003851 GO:0003677|GO:0006355
Acco07g0155 273 MobiDBLite consensus disorder prediction 1 29 - -
Acco07g0155 273 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 10 187 IPR045174 GO:0003700|GO:0006355
Acco07g0155 273 Pfam Dof domain, zinc finger 26 82 IPR003851 GO:0003677|GO:0006355
Acco07g0155 273 MobiDBLite consensus disorder prediction 88 108 - -
Acco07g0155 273 ProSitePatterns Zinc finger Dof-type signature. 30 66 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0155 Acco-ChrAcco07 1621949 1622770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0155 16 273 C2C2-Dof Transcription Factor Family AT3G61850 42.857 1.88e-53 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Acco07g0155 zf-Dof 6.8e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g0155 07 1621949 1622770 Acco07g0155 07 1621949 1622770 ECH