Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0154 ATGGGAAGAGCTCCTTGCTGTGCCAAAGTCGGGCTTCACAGAGGTCCATGGACTCTTAAAGAAGACGCGTTACTCACCAAGTATATCCAAGCTCATGGCGAAGGCCAATGGAGATCCTTACCTAAACGAGCTGGGCTTTTGAGGTGTGGAAAAAGTTGCAGGCTGAGGTGGATGAACTATCTGAGACCAGACATAAAGAGAGGAAACATAACACCCGAAGAGGAAGATCTCATAATCCGAATGCACTCTCTTCTCGGCAATCGATGGTCTCTCATTGCAGGAAGACTACCTGGAAGAACAGATAATGAAATCAAGAACCACTGGAACACACATCTCAGCAAGAGGCTAAGGAACCAAGGAACCGACCCATTTACTCACAAGAAGCTCTCTTCTTCGTCTTCATCCCTGCCGAATTCCAAGACGAAGAACAAGAAGAAGAAGAAAGGCAAGGCGCGTGAGAATAATAATGGAGTAGTAGCAGAGAAAGATGAAGAGAAGAAGACAATAGTGTATCTTCCAAAGCCAGTCAGAATCACAGCTTGTATTTCTTCTCCAATTCCCAGAAGTGATAGTAACAAGAACTTGAACTCGTTCGATTCCAACTCAGCGAGTGGGTCTACAAGCCAAGAGAAAAAGGAAGGGAAAATTCACTGGGGAGAGAATTGTAATTTTAATAACAACAACAACAATAATAATAATAACTATACTTATATTGACGAAAATGATCACGAGTTTGTGGGGTTACTTGAGGAGGACAATGACTTGGTCAACGGGTCCGACATGGAGGGGCAATCGGAGTTTCCGGCATCGGCCGAGCAACATGGGACGCTGGAGAAGCTGTACGAGGAATACTTCCAACTCTTGAATAACCAACAAAACCAAGACGAGTTGGAGTCTTTTGCTGAATCCTTGCTGGTTTGA 921 0.4452 MGRAPCCAKVGLHRGPWTLKEDALLTKYIQAHGEGQWRSLPKRAGLLRCGKSCRLRWMNYLRPDIKRGNITPEEEDLIIRMHSLLGNRWSLIAGRLPGRTDNEIKNHWNTHLSKRLRNQGTDPFTHKKLSSSSSSLPNSKTKNKKKKKGKARENNNGVVAEKDEEKKTIVYLPKPVRITACISSPIPRSDSNKNLNSFDSNSASGSTSQEKKEGKIHWGENCNFNNNNNNNNNNYTYIDENDHEFVGLLEEDNDLVNGSDMEGQSEFPASAEQHGTLEKLYEEYFQLLNNQQNQDELESFAESLLV 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0154 306 MobiDBLite consensus disorder prediction 114 160 - -
Acco07g0154 306 MobiDBLite consensus disorder prediction 184 209 - -
Acco07g0154 306 FunFam Myb transcription factor 11 67 - -
Acco07g0154 306 MobiDBLite consensus disorder prediction 183 212 - -
Acco07g0154 306 CDD SANT 16 61 IPR001005 -
Acco07g0154 306 Gene3D - 14 66 - -
Acco07g0154 306 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Acco07g0154 306 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Acco07g0154 306 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Acco07g0154 306 SMART sant 66 114 IPR001005 -
Acco07g0154 306 SMART sant 13 63 IPR001005 -
Acco07g0154 306 FunFam MYB transcription factor 68 129 - -
Acco07g0154 306 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Acco07g0154 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Acco07g0154 306 MobiDBLite consensus disorder prediction 114 139 - -
Acco07g0154 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Acco07g0154 306 CDD SANT 71 112 IPR001005 -
Acco07g0154 306 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Acco07g0154 306 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 229 - -
Acco07g0154 306 Gene3D - 71 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0154 Acco-ChrAcco07 1592148 1593438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0154 4 146 MYB Transcription Factor Family AT3G13540 66.434 6.06e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco07g0154 Myb_DNA-binding 5.5e-13 CL0123