Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0149 ATGGAAGCGAAACCCCACCAACCATGCGCAGCTTGCAGGATGCTTCGCCGGAGATGTGACACCAAGTGCCTTCTCTCCCCATACTTCCCGGCCGACGAGCTCGACAAGTTCGCCGTAGTCCACCGAGTCTTCGGCGCCAGCAACGTTATCAAAATGATTCAGATGGTGGAGGAGACGAAGAGGGAGGATACAGTGAAAGCGATGGTGTACGAGGCAATGGCGAGGGTGAGGGATCCTGTGTATGGCAGTGCAGGGGCTATCCAGCAGCTGCAGAACATGGTTCAGCAGCTCAAGTTGGAGGTGGAAACCATGAAGGCTAGGATTTCAGAGGCGCAACAACAAACAGACCAGTTGCTCGTCAATATTAACACTCATACTCATCATCTTCATCATAATATTGATAACCCTACTCCTCATCATCAGTTTCCCATCAATAATAATGTCCAAGATCCTTTCTTTGATGACTATTACGCTTCCTTTTCATCCGACCCAATGGATCAATTTCCTCTCCAAGCCGACTGGGTCTTGTAA 531 0.4953 MEAKPHQPCAACRMLRRRCDTKCLLSPYFPADELDKFAVVHRVFGASNVIKMIQMVEETKREDTVKAMVYEAMARVRDPVYGSAGAIQQLQNMVQQLKLEVETMKARISEAQQQTDQLLVNINTHTHHLHHNIDNPTPHHQFPINNNVQDPFFDDYYASFSSDPMDQFPLQADWVL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0149 176 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
Acco07g0149 176 Coils Coil 87 121 - -
Acco07g0149 176 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 126 - -
Acco07g0149 176 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0149 Acco-ChrAcco07 1527036 1527726 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0149 1 128 AS2 family AT2G30130 48.438 8.85e-39 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Acco07g0149 LOB 2e-37 No_clan